Factsheet for HORVU7Hr1G041110.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G093390.2
HORVU3Hr1G027650.2
HORVU3Hr1G054240.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G62120.1	HORVU1Hr1G093390.2	AT2G42580.1	19000166
AT3G62120.1	HORVU3Hr1G027650.2	AT2G42580.1	19000166
AT3G62120.1	HORVU3Hr1G054240.2	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G200500.1	Wheat	cytosol	89.98	91.45
TraesCS7D01G203800.1	Wheat	cytosol	88.78	90.22
TraesCS7B01G107300.1	Wheat	cytosol	88.98	90.06
HORVU4Hr1G079480.1	Barley	cytosol	5.81	82.86
HORVU3Hr1G093050.2	Barley	cytosol	82.57	80.31
EES15248	Sorghum	cytosol	80.76	79.33
EES19704	Sorghum	cytosol	80.36	78.94
Zm00001d053196_P001	Maize	cytosol	80.16	78.74
Os12t0443700-01	Rice	cytosol	79.36	77.65
Zm00001d002585_P004	Maize	cytosol	75.95	72.47
PGSC0003DMT400073336	Potato	cytosol	71.14	68.93
PGSC0003DMT400036645	Potato	cytosol	69.34	68.79
Solyc06g068320.2.1	Tomato	cytosol, extracellular, nucleus	70.94	68.74
GSMUA_Achr3P28360_001	Banana	cytosol	16.03	68.38
KRH68339	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	70.34	68.16
KRG96602	Soybean	cytosol	70.34	68.16
Solyc03g117330.2.1	Tomato	cytosol	68.74	68.06
Bra007663.1-P	Field mustard	cytosol	68.54	66.67
CDX76618	Canola	cytosol	68.54	66.41
VIT_07s0005g02620.t01	Wine grape	cytosol	68.34	66.09
Bra003487.1-P	Field mustard	cytosol	65.93	65.8
AT3G62120.1	Thale cress	cytosol	68.14	64.15
GSMUA_Achr4P09390_001	Banana	cytosol	70.54	64.0
Bra003486.1-P	Field mustard	cytosol	58.72	63.56
CDY25092	Canola	cytosol	68.54	63.33
CDX67878	Canola	cytosol	68.34	62.92
CDY11404	Canola	cytosol, mitochondrion, plastid, vacuole	68.54	61.18
CDY30248	Canola	cytosol	17.64	60.69
CDX67877	Canola	cytosol	52.3	59.73
CDY30246	Canola	cytosol	19.44	59.51
Bra017510.1-P	Field mustard	cytosol	17.23	59.31
CDY05739	Canola	cytosol	14.03	58.82
KRH16405	Soybean	cytosol	15.43	57.46
CDY25091	Canola	cytosol	50.3	57.44
CDX94184	Canola	cytosol, endoplasmic reticulum	15.83	56.03
Bra029197.1-P	Field mustard	cytosol	24.05	55.05
CDY33873	Canola	cytosol	13.23	54.55
Bra037949.1-P	Field mustard	mitochondrion	15.83	53.74
CDY67326	Canola	cytosol	16.03	53.69
Bra008444.1-P	Field mustard	cytosol	16.43	53.25
Bra028248.1-P	Field mustard	cytosol	56.11	52.04
Bra037950.1-P	Field mustard	cytosol	12.42	51.67
AT5G10880.1	Thale cress	cytosol	29.86	48.22
CDX74456	Canola	cytosol	31.26	46.43
CDY30241	Canola	cytosol	31.46	45.38
HORVU2Hr1G057880.3	Barley	mitochondrion	37.27	34.38
KRH33484	Soybean	plastid	26.05	34.3

Protein Annotations

KEGG:00970+6.1.1.15	MapMan:17.2.17	Gene3D:3.30.110.30	Gene3D:3.30.930.10	Gene3D:3.40.50.800	UniProt:A0A287W6W3
InterPro:Anticodon-bd	InterPro:Anticodon-bd_dom_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812
GO:GO:0004827	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006433	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU7Hr1G041110	EnsemblPlants:HORVU7Hr1G041110.1
InterPro:IPR006195	InterPro:IPR017449	InterPro:IPR036621	HAMAP:MF_01571	PFAM:PF00587	PFAM:PF03129
PFAM:PF09180	PRINTS:PR01046	PFscan:PS50862	PANTHER:PTHR43382	PANTHER:PTHR43382:SF2	InterPro:Pro-tRNA-ligase_IIa
InterPro:Pro-tRNA-ligase_IIa_arc-type	InterPro:Pro-tRNA_ligase_II_C	InterPro:Pro-tRNA_synth_II	InterPro:ProRS_core_arch_euk	SMART:SM00946	SUPFAM:SSF52954
SUPFAM:SSF55681	SUPFAM:SSF64586	TIGRFAMs:TIGR00408	UniParc:UPI000B475164	InterPro:aa-tRNA-synt_IIb	InterPro:aa-tRNA-synth_II

Description

No Description!

Coordinates

chrchr7H:-:112821781..112842267

Molecular Weight (calculated)

57187.3 Da

IEP (calculated)

4.912

GRAVY (calculated)

-0.292

Length

499 amino acids

Sequence
(BLAST)

001: MSTSKLGMAF KKDDNFGEWY SEVVVNSEII EYHDISGCYI LRPWAMEIWE LLKEFFDAEI KKLKLKSYYF PLLVTENVVQ KKKDHFEGFA PEVAWVTKTG
101: KSELEAPFAI RPTSEAVMYP YFARWIRSHR DLPLRCNQWC SVVRWGCSNP IPLIRSSEFL LQEGHTVFAT KEEADEEVLH ILELYRRIYE EFLAVPVSKG
201: WKSEMEKFAG GLYTTSVEAF IPNTGLGIQG ATSNCLGQNF AKIFEIFFED EKDPAQKNNE KDKRSLVWQN SWAYTTRSIG VMVMTHGDDK GLVLPPRVAP
301: IQVIIIPDLL EDTDTTAING ACETIVCTLN QAGIRADLDA RENYYLEWKY SHWEMKGVPL RIEIDLKDLA NKQVRVVRRD KGAKVDIRST DLVEHVKVLL
401: AEIQDILFET AKEKRDACIE VISTWDEFTA ALNDKKLILA PWCDEEEVEK DVRARTEGAD LGSAKTLCTP FDQPDLMEGT VCFACGKPAK TWSFWGRSY

Best Arabidopsis Sequence Match ( AT3G62120.1 )
(BLAST)

001: MADPSEQKEK VVKEKKEKVK KEKVVKEKVA KASSSGQKKK DVKKETGLGL SVKKDENFGE WYSEVCKQDM IEYYDISGCY ILRPWSMAIW EIMQIFFDAE
101: IKKMKVKNCY FPLFVSPGVL EKEKDHIEGF APEVAWVTKS GKSDLEVPIA IRPTSETVMY PYYSKWIRGH RDLPLKLNQW CNVVRWEFSN PTPFIRSREF
201: LWQEGHTAFA TKAEADEEVL QILELYRRIY EEYLAVPVVK GMKSENEKFA GGLYTTSVEA FIPNTGRGVQ GATSHCLGQN FAKMFEINFE NEKAETEMVW
301: QNSWAYSTRT IGVMIMTHGD DKGLVLPPKV ASVQVVVIPV PYKDANTQGI YDACTATASA LCEAGIRAEE DLRDNYSPGW KYSDWEMKGV PLRIEIGPRD
401: LENDQVRTVR RDNGVKEDIP RGSLVEHVKE LLEKIQQNMY EVAKQKREAC VQEVKTWDEF IKALNEKKLI LAPWCDEEEV ERDVKARTKG ETGAAKTLCS
501: PFDQPELPEG TLCFASGKPA KKWTYWGRSY

Arabidopsis Description

Proline--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M1R2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.