CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25091	Canola	cytosol	94.51	94.51
Bra003486.1-P	Field mustard	cytosol	94.05	89.15
CDY30248	Canola	cytosol	23.34	70.34
CDY05739	Canola	cytosol	18.54	68.07
CDY33873	Canola	cytosol	18.31	66.12
CDX94184	Canola	cytosol, endoplasmic reticulum	21.28	65.96
CDY67326	Canola	cytosol	21.51	63.09
CDX76618	Canola	cytosol	72.77	61.75
PGSC0003DMT400073336	Potato	cytosol	69.79	59.22
Solyc06g068320.2.1	Tomato	cytosol, extracellular, nucleus	69.57	59.03
PGSC0003DMT400036645	Potato	cytosol	67.51	58.65
KRG96602	Soybean	cytosol	69.11	58.64
CDY25092	Canola	cytosol	72.31	58.52
KRH68339	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	68.88	58.45
TraesCS3D01G415200.1	Wheat	cytosol, golgi	67.51	58.42
TraesCS3B01G455000.1	Wheat	cytosol, extracellular, golgi	67.28	58.22
VIT_07s0005g02620.t01	Wine grape	cytosol	68.65	58.14
CDX67878	Canola	cytosol	72.08	58.12
TraesCS1B01G342200.1	Wheat	cytosol, golgi	67.05	58.02
Solyc03g117330.2.1	Tomato	cytosol	66.82	57.94
EES15248	Sorghum	cytosol	67.28	57.87
TraesCS3A01G419600.1	Wheat	cytosol	66.82	57.82
Zm00001d053196_P001	Maize	cytosol	67.05	57.68
EES19704	Sorghum	cytosol	66.59	57.28
HORVU3Hr1G093050.2	Barley	cytosol	67.05	57.12
TraesCS1D01G210600.3	Wheat	cytosol	66.82	56.92
CDY11404	Canola	cytosol, mitochondrion, plastid, vacuole	72.77	56.89
Os12t0443700-01	Rice	cytosol	66.13	56.67
TraesCS7A01G200500.1	Wheat	cytosol	61.78	54.99
TraesCS7B01G107300.1	Wheat	cytosol	61.78	54.77
TraesCS7D01G203800.1	Wheat	cytosol	61.33	54.58
GSMUA_Achr4P09390_001	Banana	cytosol	68.65	54.55
HORVU7Hr1G041110.1	Barley	cytosol	59.73	52.3
Zm00001d002585_P004	Maize	cytosol	62.47	52.2
CDX74456	Canola	cytosol	40.05	52.08
HORVU4Hr1G079480.1	Barley	cytosol	4.12	51.43
CDY30241	Canola	cytosol	40.05	50.58
KRH16405	Soybean	cytosol	14.87	48.51
CDY30246	Canola	cytosol	17.39	46.63
GSMUA_Achr3P28360_001	Banana	cytosol	11.9	44.44
CDY27824	Canola	mitochondrion, plastid	39.59	32.34
CDY27062	Canola	plastid	39.82	32.1
CDX91656	Canola	plastid	37.07	31.95
CDY00534	Canola	cytosol	28.15	31.14
KRH33484	Soybean	plastid	25.4	29.29

Protein Annotations

KEGG:00970+6.1.1.15	MapMan:17.2.17	Gene3D:3.30.110.30	Gene3D:3.30.930.10	Gene3D:3.40.50.800	GO:A0A078BUH6
InterPro:Anticodon-bd	InterPro:Anticodon-bd_dom_sf	EnsemblPlants:CDX67877	ProteinID:CDX67877	ProteinID:CDX67877.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004827	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412
GO:GO:0006418	GO:GO:0006433	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00099078001	InterPro:IPR006195	InterPro:IPR017449	InterPro:IPR036621	PFAM:PF00587
PFAM:PF03129	PFAM:PF09180	PFscan:PS50862	PANTHER:PTHR43382	InterPro:Pro-tRNA_ligase_II_C	InterPro:Pro-tRNA_synth_II
SMART:SM00946	SUPFAM:SSF52954	SUPFAM:SSF55681	SUPFAM:SSF64586	UniParc:UPI0004EF3755	InterPro:aa-tRNA-synt_IIb
InterPro:aa-tRNA-synth_II	SEG:seg	:	:	:	:

Description

BnaA07g19170D

Coordinates

chrLK031787:-:2729060..2731272

Molecular Weight (calculated)

50064.1 Da

IEP (calculated)

7.188

GRAVY (calculated)

-0.463

Length

437 amino acids

Sequence
(BLAST)

001: MKISDNGILR CGEMMAYYDI SGCYILRPNA MKIWNIMRTY FDAVLEKAEV DENYFPLFVS ASVLEKEKDH VQGCMGYKSC KWIKSHRDLP LKLNQWNNVV
101: RWESREFLWQ EGHTAHATEE EADKEVLEVL DHYRHLYEEY LAVPVVKGMK SENEKFAGAR YTTSVEAFIP ETGRGIQGAT SHCLGTKFAK MFDIKFTNKE
201: GKNELVWQNS WAYSTRTIGV MIMTHGDDKG LVNPPKVAPI QVIVIPVPFK DADTKEISKA CCAVKDALRE AGLRAKEDLS DNYSPKWKYS HWEMKGVPLR
301: IEIGPRDLAK NQVRTVRRDN GVKADVPRVG LVEYVMELLG KIQQNMFDVA KQKRDDACVV VKTWDEFVEA LGQKKLILAP WCDEEEVEMD VKRRTKDEVG
401: AAKTLCSPFD QPEIPEGTLC FASGKLAKKW TYWGKSY

Best Arabidopsis Sequence Match ( AT3G62120.3 )
(BLAST)

001: MADPSEQKEK VVKEKVAKAS SSGQKKKDVK KETGLGLSVK KDENFGEWYS EVCKQDMIEY YDISGCYILR PWSMAIWEIM QIFFDAEIKK MKVKNCYFPL
101: FVSPGVLEKE KDHIEGFAPE VAWVTKSGKS DLEVPIAIRP TSETVMYPYY SKWIRGHRDL PLKLNQWCNV VRWEFSNPTP FIRSREFLWQ EGHTAFATKA
201: EADEEVLQIL ELYRRIYEEY LAVPVVKGMK SENEKFAGGL YTTSVEAFIP NTGRGVQGAT SHCLGQNFAK MFEINFENEK AETEMVWQNS WAYSTRTIGV
301: MIMTHGDDKG LVLPPKVASV QVVVIPVPYK DANTQGIYDA CTATASALCE AGIRAEEDLR DNYSPGWKYS DWEMKGVPLR IEIGPRDLEN DQVRTVRRDN
401: GVKEDIPRGS LVEHVKELLE KIQQNMYEVA KQKREACVQE VKTWDEFIKA LNEKKLILAP WCDEEEVERD VKARTKGETG AAKTLCSPFD QPELPEGTLC
501: FASGKPAKKW TYWGRSY

Arabidopsis Description

Proline--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M1R2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.