CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30248	Canola	cytosol	40.48	93.79
CDY30241	Canola	cytosol	94.35	91.62
Bra028248.1-P	Field mustard	cytosol	99.7	62.27
AT5G10880.1	Thale cress	cytosol	53.27	57.93
CDX67877	Canola	cytosol	52.08	40.05
HORVU4Hr1G079480.1	Barley	cytosol	4.17	40.0
CDY25091	Canola	cytosol	49.7	38.22
CDX76618	Canola	cytosol	55.36	36.12
PGSC0003DMT400073336	Potato	cytosol	54.17	35.34
PGSC0003DMT400036645	Potato	cytosol	52.38	34.99
Solyc06g068320.2.1	Tomato	cytosol, extracellular, nucleus	53.57	34.95
VIT_07s0005g02620.t01	Wine grape	cytosol	53.57	34.88
TraesCS3D01G415200.1	Wheat	cytosol, golgi	52.38	34.85
TraesCS3B01G455000.1	Wheat	cytosol, extracellular, golgi	52.38	34.85
Zm00001d053196_P001	Maize	cytosol	52.68	34.84
TraesCS1D01G210600.3	Wheat	cytosol	52.98	34.7
HORVU3Hr1G093050.2	Barley	cytosol	52.98	34.7
TraesCS3A01G419600.1	Wheat	cytosol	52.08	34.65
TraesCS1B01G342200.1	Wheat	cytosol, golgi	52.08	34.65
Solyc03g117330.2.1	Tomato	cytosol	51.79	34.52
Os12t0443700-01	Rice	cytosol	52.38	34.51
EES19704	Sorghum	cytosol	52.08	34.45
CDY25092	Canola	cytosol	55.06	34.26
EES15248	Sorghum	cytosol	51.79	34.25
CDX67878	Canola	cytosol	55.06	34.13
KRG96602	Soybean	cytosol	52.08	33.98
KRH68339	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	51.79	33.79
CDY11404	Canola	cytosol, mitochondrion, plastid, vacuole	55.95	33.63
Zm00001d002585_P004	Maize	cytosol	50.89	32.7
TraesCS7A01G200500.1	Wheat	cytosol	47.32	32.38
TraesCS7B01G107300.1	Wheat	cytosol	46.43	31.64
GSMUA_Achr4P09390_001	Banana	cytosol	51.79	31.64
TraesCS7D01G203800.1	Wheat	cytosol	46.13	31.57
HORVU7Hr1G041110.1	Barley	cytosol	46.43	31.26
CDY27062	Canola	plastid	31.25	19.37
CDY27824	Canola	mitochondrion, plastid	30.65	19.25
CDY05739	Canola	cytosol	6.55	18.49
CDX91656	Canola	plastid	27.38	18.15
CDX94184	Canola	cytosol, endoplasmic reticulum	7.44	17.73
CDY00534	Canola	cytosol	19.94	16.96
CDY33873	Canola	cytosol	5.95	16.53
CDY67326	Canola	cytosol	6.55	14.77
GSMUA_Achr3P28360_001	Banana	cytosol	4.46	12.82
KRH16405	Soybean	cytosol	4.46	11.19
CDY30246	Canola	cytosol	5.06	10.43
KRH33484	Soybean	plastid	9.82	8.71

Protein Annotations

KEGG:00970+6.1.1.15	Gene3D:3.30.110.30	Gene3D:3.30.930.10	Gene3D:3.40.50.800	MapMan:35.1	GO:A0A078CBJ3
InterPro:Anticodon-bd	InterPro:Anticodon-bd_dom_sf	EnsemblPlants:CDX74456	ProteinID:CDX74456	ProteinID:CDX74456.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004827	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006433
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00114328001
InterPro:IPR017449	InterPro:IPR036621	PFAM:PF03129	PFAM:PF09180	PANTHER:PTHR43382	PANTHER:PTHR43382:SF2
InterPro:Pro-tRNA_ligase_II_C	InterPro:Pro-tRNA_synth_II	SMART:SM00946	SUPFAM:SSF52954	SUPFAM:SSF64586	UniParc:UPI0004EE0CEF
SEG:seg	:	:	:	:	:

Description

BnaA04g09330D

Coordinates

chrLK031801:+:421367..422983

Molecular Weight (calculated)

38343.9 Da

IEP (calculated)

7.077

GRAVY (calculated)

-0.635

Length

336 amino acids

Sequence
(BLAST)

001: MSKSGREEDV GSSSSQSMVE KTLEVAKASV FGERKEKEMK KETRLGISAK KDEDFPSWYS QVCRFGELIT LSDTKGLYIL EPSATKIWNT LRSYMDAELE
101: KLGGVEEKKF PITRSIGVMA MTHGDDKGLV LPPKVARYQV VVVPVPFKGA DTKRISQECQ AVKTTLQGAG VRAIVDERDN YACGWKYADW EMKGVPLRIE
201: LGPRDLEKNQ VRVVRRDTRV KMDVLRVDLV EKVKDLLEVI QRDLYDDAKR KLEESIQKVE TWDEFKEALR QKKLVLAPWC DEVEVENDVK ENSKGENEAG
301: AKTLCTPFEQ PELREDTLCF ASGKPAKKWT YWGRSY

Best Arabidopsis Sequence Match ( AT5G10880.1 )
(BLAST)

001: MVKETRLGIT AKKDEDFGKW YSEACRFGEL VEYYESVKGC YILKPSGISD EYLERYTNTT LKGLLQRLLG LQELVDKRTQ GPPFEAACMT HGDDKGLVFP
101: PKVAPVQVVV IHVPIKGAAD YQELCDACEA VESTLLGAGI RAEADIRDNY SCGWKYADQE LTGVPLRIET GPRDLANDQV RIVTRDNGAK MDVKRGDLIE
201: QVKDLLEKIQ SNLYDVAKRK VEECTQKVET WDEFVEALSQ KKLILAPWCD KVEVEKDVKR RTRGDETGGG GGGAKTLCTP LEQPELGEET LCFASGKPAK
301: KWSYWGRSY

Arabidopsis Description

Uncharacterized protein T30N20_150 [Source:UniProtKB/TrEMBL;Acc:Q9LEV2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.