Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007663.1-P | Field mustard | cytosol | 89.62 | 92.59 |
| CDX76618 | Canola | cytosol | 89.81 | 92.43 |
| Bra003487.1-P | Field mustard | cytosol | 86.42 | 91.6 |
| CDY25092 | Canola | cytosol | 90.0 | 88.33 |
| CDX67878 | Canola | cytosol | 89.81 | 87.82 |
| CDY11404 | Canola | cytosol, mitochondrion, plastid, vacuole | 90.57 | 85.87 |
| PGSC0003DMT400073336 | Potato | cytosol | 81.13 | 83.5 |
| Solyc06g068320.2.1 | Tomato | cytosol, extracellular, nucleus | 80.94 | 83.3 |
| PGSC0003DMT400036645 | Potato | cytosol | 78.3 | 82.5 |
| KRG96602 | Soybean | cytosol | 80.0 | 82.33 |
| GSMUA_Achr3P28360_001 | Banana | cytosol | 18.11 | 82.05 |
| KRH68339 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 79.62 | 81.94 |
| Solyc03g117330.2.1 | Tomato | cytosol | 77.74 | 81.75 |
| VIT_07s0005g02620.t01 | Wine grape | cytosol | 76.98 | 79.07 |
| TraesCS3D01G415200.1 | Wheat | cytosol, golgi | 74.72 | 78.42 |
| TraesCS3B01G455000.1 | Wheat | cytosol, extracellular, golgi | 74.53 | 78.22 |
| TraesCS1B01G342200.1 | Wheat | cytosol, golgi | 74.53 | 78.22 |
| EES15248 | Sorghum | cytosol | 74.91 | 78.15 |
| TraesCS3A01G419600.1 | Wheat | cytosol | 74.34 | 78.02 |
| Zm00001d053196_P001 | Maize | cytosol | 74.72 | 77.95 |
| HORVU3Hr1G093050.2 | Barley | cytosol | 74.91 | 77.39 |
| EES19704 | Sorghum | cytosol | 74.15 | 77.36 |
| Os12t0443700-01 | Rice | cytosol | 73.77 | 76.67 |
| TraesCS1D01G210600.3 | Wheat | cytosol | 74.15 | 76.61 |
| GSMUA_Achr4P09390_001 | Banana | cytosol | 76.98 | 74.18 |
| Zm00001d002585_P004 | Maize | cytosol | 70.57 | 71.51 |
| TraesCS7A01G200500.1 | Wheat | cytosol | 65.28 | 70.47 |
| TraesCS7D01G203800.1 | Wheat | cytosol | 65.28 | 70.47 |
| TraesCS7B01G107300.1 | Wheat | cytosol | 65.47 | 70.39 |
| KRH16405 | Soybean | cytosol | 17.36 | 68.66 |
| HORVU7Hr1G041110.1 | Barley | cytosol | 64.15 | 68.14 |
| HORVU4Hr1G079480.1 | Barley | cytosol | 3.96 | 60.0 |
| AT5G10880.1 | Thale cress | cytosol | 33.96 | 58.25 |
| KRH33484 | Soybean | plastid | 27.74 | 38.79 |
| AT5G52520.1 | Thale cress | plastid | 38.11 | 37.2 |
Protein Annotations
| KEGG:00970+6.1.1.15 | MapMan:17.2.17 | Gene3D:3.30.110.30 | Gene3D:3.30.930.10 | Gene3D:3.40.50.800 | EntrezGene:825385 |
| UniProt:A0A178V838 | ProteinID:AEE80312.1 | ProteinID:AEE80313.1 | ArrayExpress:AT3G62120 | EnsemblPlantsGene:AT3G62120 | RefSeq:AT3G62120 |
| TAIR:AT3G62120 | RefSeq:AT3G62120-TAIR-G | EnsemblPlants:AT3G62120.1 | TAIR:AT3G62120.1 | EMBL:AY059812 | EMBL:AY128720 |
| InterPro:Anticodon-bd | InterPro:Anticodon-bd_dom_sf | Unigene:At.23933 | ProteinID:CAB71872.1 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004812 | GO:GO:0004827 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 |
| GO:GO:0006412 | GO:GO:0006418 | GO:GO:0006433 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009506 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016874 | GO:GO:0017101 | GO:GO:0019538 |
| InterPro:IPR006195 | InterPro:IPR017449 | InterPro:IPR036621 | HAMAP:MF_01571 | RefSeq:NP_191771.1 | RefSeq:NP_850736.1 |
| ProteinID:OAP01944.1 | PFAM:PF00587 | PFAM:PF03129 | PFAM:PF09180 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR01046 | PFscan:PS50862 |
| PANTHER:PTHR43382 | PANTHER:PTHR43382:SF2 | InterPro:Pro-tRNA-ligase_IIa | InterPro:Pro-tRNA-ligase_IIa_arc-type | InterPro:Pro-tRNA_ligase_II_C | InterPro:Pro-tRNA_synth_II |
| InterPro:ProRS_core_arch_euk | UniProt:Q9M1R2 | SMART:SM00946 | SUPFAM:SSF52954 | SUPFAM:SSF55681 | SUPFAM:SSF64586 |
| TIGRFAMs:TIGR00408 | UniParc:UPI000009CD43 | InterPro:aa-tRNA-synt_IIb | InterPro:aa-tRNA-synth_II | SEG:seg | : |
Description
Proline--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M1R2]
Coordinates
chr3:-:23001030..23004321
Molecular Weight (calculated)
60758.6 Da
IEP (calculated)
6.314
GRAVY (calculated)
-0.561
Length
530 amino acids
Sequence
(BLAST)
(BLAST)
001: MADPSEQKEK VVKEKKEKVK KEKVVKEKVA KASSSGQKKK DVKKETGLGL SVKKDENFGE WYSEVCKQDM IEYYDISGCY ILRPWSMAIW EIMQIFFDAE
101: IKKMKVKNCY FPLFVSPGVL EKEKDHIEGF APEVAWVTKS GKSDLEVPIA IRPTSETVMY PYYSKWIRGH RDLPLKLNQW CNVVRWEFSN PTPFIRSREF
201: LWQEGHTAFA TKAEADEEVL QILELYRRIY EEYLAVPVVK GMKSENEKFA GGLYTTSVEA FIPNTGRGVQ GATSHCLGQN FAKMFEINFE NEKAETEMVW
301: QNSWAYSTRT IGVMIMTHGD DKGLVLPPKV ASVQVVVIPV PYKDANTQGI YDACTATASA LCEAGIRAEE DLRDNYSPGW KYSDWEMKGV PLRIEIGPRD
401: LENDQVRTVR RDNGVKEDIP RGSLVEHVKE LLEKIQQNMY EVAKQKREAC VQEVKTWDEF IKALNEKKLI LAPWCDEEEV ERDVKARTKG ETGAAKTLCS
501: PFDQPELPEG TLCFASGKPA KKWTYWGRSY
101: IKKMKVKNCY FPLFVSPGVL EKEKDHIEGF APEVAWVTKS GKSDLEVPIA IRPTSETVMY PYYSKWIRGH RDLPLKLNQW CNVVRWEFSN PTPFIRSREF
201: LWQEGHTAFA TKAEADEEVL QILELYRRIY EEYLAVPVVK GMKSENEKFA GGLYTTSVEA FIPNTGRGVQ GATSHCLGQN FAKMFEINFE NEKAETEMVW
301: QNSWAYSTRT IGVMIMTHGD DKGLVLPPKV ASVQVVVIPV PYKDANTQGI YDACTATASA LCEAGIRAEE DLRDNYSPGW KYSDWEMKGV PLRIEIGPRD
401: LENDQVRTVR RDNGVKEDIP RGSLVEHVKE LLEKIQQNMY EVAKQKREAC VQEVKTWDEF IKALNEKKLI LAPWCDEEEV ERDVKARTKG ETGAAKTLCS
501: PFDQPELPEG TLCFASGKPA KKWTYWGRSY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.