Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27062 | Canola | plastid | 93.0 | 93.17 |
| CDX91656 | Canola | plastid | 86.92 | 93.1 |
| Bra022597.1-P | Field mustard | plastid | 92.63 | 92.8 |
| CDY27824 | Canola | mitochondrion, plastid | 90.24 | 91.59 |
| VIT_16s0050g00960.t01 | Wine grape | cytosol | 72.93 | 88.39 |
| GSMUA_Achr7P07770_001 | Banana | cytosol | 2.58 | 87.5 |
| GSMUA_Achr5P23600_001 | Banana | cytosol | 69.98 | 84.82 |
| Os07t0165000-01 | Rice | cytosol, mitochondrion, plastid | 55.43 | 79.84 |
| KRH38393 | Soybean | plastid | 78.45 | 78.02 |
| KRH08879 | Soybean | plastid | 78.08 | 77.66 |
| EER95900 | Sorghum | mitochondrion | 75.69 | 77.55 |
| Zm00001d018870_P001 | Maize | plastid | 75.87 | 76.72 |
| Solyc01g096870.2.1 | Tomato | plastid | 76.98 | 76.42 |
| PGSC0003DMT400070798 | Potato | plastid | 76.8 | 76.23 |
| Bra028313.1-P | Field mustard | cytosol | 56.91 | 75.74 |
| TraesCS2A01G246200.1 | Wheat | mitochondrion | 74.95 | 75.23 |
| TraesCS2D01G248600.1 | Wheat | mitochondrion | 74.77 | 75.05 |
| TraesCS2B01G270500.1 | Wheat | mitochondrion | 74.22 | 74.49 |
| HORVU2Hr1G057880.3 | Barley | mitochondrion | 74.03 | 74.31 |
| CDY00534 | Canola | cytosol | 53.59 | 73.67 |
| GSMUA_Achr7P07780_001 | Banana | cytosol | 16.57 | 61.22 |
| AT3G62120.1 | Thale cress | cytosol | 37.2 | 38.11 |
| AT5G10880.1 | Thale cress | cytosol | 16.94 | 29.77 |
Protein Annotations
| KEGG:00970+6.1.1.15 | MapMan:17.2.17 | Gene3D:3.30.110.30 | Gene3D:3.30.930.10 | Gene3D:3.40.50.800 | EntrezGene:835328 |
| ProteinID:AED96224.1 | EMBL:AK176421 | ArrayExpress:AT5G52520 | EnsemblPlantsGene:AT5G52520 | RefSeq:AT5G52520 | TAIR:AT5G52520 |
| RefSeq:AT5G52520-TAIR-G | EnsemblPlants:AT5G52520.1 | TAIR:AT5G52520.1 | InterPro:Anticodon-bd | InterPro:Anticodon-bd_dom_sf | Unigene:At.28016 |
| ProteinID:BAB10183.1 | EMBL:BT010566 | GO:GO:0000003 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004812 | GO:GO:0004827 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0006418 |
| GO:GO:0006433 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009553 | GO:GO:0009570 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 |
| GO:GO:0010109 | GO:GO:0015979 | GO:GO:0016874 | GO:GO:0017101 | GO:GO:0019538 | GO:GO:0048316 |
| GO:GO:0048481 | InterPro:IPR006195 | InterPro:IPR017449 | InterPro:IPR036621 | HAMAP:MF_01571 | RefSeq:NP_200065.1 |
| Symbol:OVA6 | PFAM:PF00587 | PFAM:PF03129 | PFAM:PF09180 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR01046 |
| PFscan:PS50862 | PANTHER:PTHR43382 | PANTHER:PTHR43382:SF3 | InterPro:Pro-tRNA-ligase_IIa | InterPro:Pro-tRNA-ligase_IIa_arc-type | InterPro:Pro-tRNA_ligase_II_C |
| InterPro:Pro-tRNA_synth_II | InterPro:ProRS_core_arch_euk | UniProt:Q9FYR6 | SMART:SM00946 | SUPFAM:SSF52954 | SUPFAM:SSF55681 |
| SUPFAM:SSF64586 | TIGRFAMs:TIGR00408 | UniParc:UPI00000A533E | InterPro:aa-tRNA-synt_IIb | InterPro:aa-tRNA-synth_II | SEG:seg |
Description
OVA6Proline--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR6]
Coordinates
chr5:+:21311020..21314180
Molecular Weight (calculated)
60750.3 Da
IEP (calculated)
7.024
GRAVY (calculated)
-0.327
Length
543 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSSLRLPS LTSLLFPATT RYPATLRRTV CLRNRPLSGF ATAPSGTASP ETKSSEVDRL RSDRAVTPRS QDFNAWYLDV IASAELADYG PVRGTMVIRP
101: YGYAIWEAIQ DYLNVKFKET GHSNMYFPQF IPYSFIEKEA SHVEGFSPEL ALVTVGGGKE LEEKLVVRPT SETIVNHMFT QWIHSYRDLP LMINQWANVT
201: RWEMRTKPFI RTLEFLWQEG HTAHATPEEA EKEAKQMIEI YTRFAFEQTA IPVIPGRKSK LETFAGADIT YTIEAMMGDR KALQAGTSHN LGQNFSRAFG
301: TQFADENGER QHVWQTSWAV STRFVGGIIM THGDDTGLML PPKIAPIQVV IVPIWKKDTE KTGVLSAASS VKEALQTAGV RVKLDDTDQR TPGWKFNFWE
401: MKGIPLRIEI GPRDVSSNSV VVSRRDVPGK AGKVFGISME PSTLVAYVKE KLDEIQTSLL EKALSFRDSN IVDVNSYAEL KDAISSGKWA RGPWSASDAD
501: EQRVKEETGA TIRCFPFEQT QGTKTCLMTG NPAEEVAIFA KSY
101: YGYAIWEAIQ DYLNVKFKET GHSNMYFPQF IPYSFIEKEA SHVEGFSPEL ALVTVGGGKE LEEKLVVRPT SETIVNHMFT QWIHSYRDLP LMINQWANVT
201: RWEMRTKPFI RTLEFLWQEG HTAHATPEEA EKEAKQMIEI YTRFAFEQTA IPVIPGRKSK LETFAGADIT YTIEAMMGDR KALQAGTSHN LGQNFSRAFG
301: TQFADENGER QHVWQTSWAV STRFVGGIIM THGDDTGLML PPKIAPIQVV IVPIWKKDTE KTGVLSAASS VKEALQTAGV RVKLDDTDQR TPGWKFNFWE
401: MKGIPLRIEI GPRDVSSNSV VVSRRDVPGK AGKVFGISME PSTLVAYVKE KLDEIQTSLL EKALSFRDSN IVDVNSYAEL KDAISSGKWA RGPWSASDAD
501: EQRVKEETGA TIRCFPFEQT QGTKTCLMTG NPAEEVAIFA KSY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.