Factsheet for GSMUA_Achr7P07780_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0165000-01	Rice	cytosol, mitochondrion, plastid	62.59	24.4
GSMUA_Achr5P23600_001	Banana	cytosol	73.47	24.11
VIT_16s0050g00960.t01	Wine grape	cytosol	63.27	20.76
TraesCS2D01G248600.1	Wheat	mitochondrion	65.99	17.93
TraesCS2A01G246200.1	Wheat	mitochondrion	65.99	17.93
HORVU2Hr1G057880.3	Barley	mitochondrion	65.31	17.74
TraesCS2B01G270500.1	Wheat	mitochondrion	64.63	17.56
EER95900	Sorghum	mitochondrion	63.27	17.55
Zm00001d018870_P001	Maize	plastid	63.27	17.32
AT5G52520.1	Thale cress	plastid	61.22	16.57
CDY00534	Canola	cytosol	44.22	16.46
Bra022597.1-P	Field mustard	plastid	60.54	16.42
CDY27062	Canola	plastid	60.54	16.42
CDY27824	Canola	mitochondrion, plastid	59.18	16.26
KRH38393	Soybean	plastid	59.86	16.12
Bra028313.1-P	Field mustard	cytosol	44.22	15.93
KRH08879	Soybean	plastid	57.82	15.57
PGSC0003DMT400070798	Potato	plastid	57.82	15.54
Solyc01g096870.2.1	Tomato	plastid	57.82	15.54
CDX91656	Canola	plastid	42.18	12.23
GSMUA_Achr4P09390_001	Banana	cytosol	29.93	8.0
GSMUA_Achr7P07770_001	Banana	cytosol	0.0	0.0
GSMUA_Achr3P28360_001	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr7P07780_001	EnsemblPlants:GSMUA_Achr7T07780_001	EnsemblPlantsGene:GSMUA_Achr7G07780_001	Gene3D:3.40.50.800	InterPro:Anticodon-bd	InterPro:Anticodon-bd_dom_sf
InterPro:IPR036621	PANTHER:PTHR43382	PANTHER:PTHR43382:SF3	PFAM:PF03129	SUPFAM:SSF52954	UniParc:UPI000296204F
UniProt:M0TFL8	MapMan:35.1	:	:	:	:

Description

Putative Prolyl-tRNA synthetase [Source:GMGC_GENE;Acc:GSMUA_Achr7G07780_001]

Coordinates

chr7:-:5782240..5783691

Molecular Weight (calculated)

16615.9 Da

IEP (calculated)

6.811

GRAVY (calculated)

-0.276

Length

147 amino acids

Sequence
(BLAST)

001: MDAITLLKEV LHKAGVKIKV DDSEQRTPGW KFNFWEMKVR LLLSFAYLLY VGPHDVANWS VVVSRRDVPG KPGKDLGISM EPSVLVSHVK SRLEDIQASL
101: LQRATSFRDS NFADVNSYEV LKEVITEGKW ARGPWSASDA EELKVNE

Best Arabidopsis Sequence Match ( AT5G52520.1 )
(BLAST)

001: MVSSSLRLPS LTSLLFPATT RYPATLRRTV CLRNRPLSGF ATAPSGTASP ETKSSEVDRL RSDRAVTPRS QDFNAWYLDV IASAELADYG PVRGTMVIRP
101: YGYAIWEAIQ DYLNVKFKET GHSNMYFPQF IPYSFIEKEA SHVEGFSPEL ALVTVGGGKE LEEKLVVRPT SETIVNHMFT QWIHSYRDLP LMINQWANVT
201: RWEMRTKPFI RTLEFLWQEG HTAHATPEEA EKEAKQMIEI YTRFAFEQTA IPVIPGRKSK LETFAGADIT YTIEAMMGDR KALQAGTSHN LGQNFSRAFG
301: TQFADENGER QHVWQTSWAV STRFVGGIIM THGDDTGLML PPKIAPIQVV IVPIWKKDTE KTGVLSAASS VKEALQTAGV RVKLDDTDQR TPGWKFNFWE
401: MKGIPLRIEI GPRDVSSNSV VVSRRDVPGK AGKVFGISME PSTLVAYVKE KLDEIQTSLL EKALSFRDSN IVDVNSYAEL KDAISSGKWA RGPWSASDAD
501: EQRVKEETGA TIRCFPFEQT QGTKTCLMTG NPAEEVAIFA KSY

Arabidopsis Description

OVA6Proline--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.