Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10980.1 | KRH22291 | AT2G42580.1 | 19000166 |
| AT3G10980.1 | KRH27037 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31210 | Soybean | cytosol | 74.73 | 73.81 |
| KRG97664 | Soybean | cytosol, nucleus, peroxisome | 69.71 | 72.17 |
| Solyc06g048810.2.1 | Tomato | plasma membrane | 45.88 | 68.09 |
| PGSC0003DMT400017002 | Potato | cytosol, nucleus, plasma membrane | 62.37 | 62.48 |
| CDX98836 | Canola | plasma membrane | 46.77 | 61.7 |
| CDX70157 | Canola | plasma membrane | 47.67 | 61.29 |
| Bra009106.1-P | Field mustard | plasma membrane | 46.95 | 60.37 |
| AT3G10980.1 | Thale cress | cytosol, peroxisome, plasma membrane | 59.68 | 59.15 |
| CDY00984 | Canola | plastid | 54.66 | 58.43 |
| CDY70258 | Canola | plastid | 55.38 | 58.41 |
| Bra029884.1-P | Field mustard | plastid | 54.84 | 57.95 |
| AT5G05350.1 | Thale cress | cytosol, peroxisome, plasma membrane, plastid | 54.12 | 57.41 |
| Solyc06g048780.1.1 | Tomato | cytosol, nucleus, plasma membrane, plastid | 26.52 | 55.22 |
| GSMUA_AchrUn_... | Banana | cytosol | 53.76 | 54.84 |
| Solyc06g048790.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 49.46 | 54.65 |
| Zm00001d010607_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 53.76 | 53.1 |
| Os05t0474900-01 | Rice | plasma membrane | 52.69 | 53.07 |
| GSMUA_Achr8P21270_001 | Banana | cytosol | 38.35 | 52.58 |
| OQU78568 | Sorghum | plasma membrane, plastid | 43.91 | 52.58 |
| EES19686 | Sorghum | cytosol, nucleus, peroxisome | 53.23 | 52.47 |
| PGSC0003DMT400070946 | Potato | plasma membrane | 13.98 | 52.35 |
| Zm00001d052297_P001 | Maize | plasma membrane | 40.14 | 50.34 |
| HORVU1Hr1G070270.1 | Barley | cytosol, peroxisome, plasma membrane | 50.36 | 50.27 |
| VIT_13s0067g02190.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 63.98 | 50.21 |
| TraesCS1A01G298700.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 50.18 | 49.82 |
| TraesCS1D01G292600.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 50.18 | 49.82 |
| KRH65507 | Soybean | plasma membrane | 49.64 | 49.64 |
| TraesCS1B01G308300.1 | Wheat | cytosol, peroxisome, plasma membrane | 49.28 | 48.93 |
| KRH76069 | Soybean | peroxisome, plasma membrane, plastid, vacuole | 31.72 | 46.7 |
| TraesCS3D01G542600.1 | Wheat | plasma membrane | 45.7 | 44.74 |
| TraesCS3B01G602800.1 | Wheat | plasma membrane | 44.98 | 41.83 |
| TraesCS3A01G537100.1 | Wheat | cytosol, nucleus, plasma membrane | 44.27 | 40.43 |
| HORVU3Hr1G117910.1 | Barley | cytosol, nucleus, plasma membrane | 43.73 | 39.87 |
Protein Annotations
| EMBL:ACUP02001272 | EnsemblPlants:KRH73231 | EnsemblPlantsGene:GLYMA_02G260500 | EntrezGene:100795088 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PFAM:PF04749 | PFAM:PF11204 |
| ProteinID:KRH73231 | ProteinID:KRH73231.1 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI0002336D1C |
| UniProt:I1JIC0 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:44701769..44704798
Molecular Weight (calculated)
63114.6 Da
IEP (calculated)
8.929
GRAVY (calculated)
-0.122
Length
558 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSVDNGKDE IEESNGSKVN EFASIDISTS RRTMVGNENP QRKFQGTLSS IPNRINFFKF GSASAKFRRL ATEKDQISQG VPSPGSIGLR ERFSGMFAKK
101: LDWVSLKKMC LEWFRDPMNI ALFVWILCVA ISGAILFLVM TGMLNAVLPR KSQRNAWFEV NNQILNALFT LMCLYQHPKR IYHLVLLCRW SPQDISRLRK
201: VYCKNGTYKP HEWAHMMVMV ILLNVNCFAQ YALCGLNLGY KRSDRPAIGV GICISFAIGA PAVAGLYSIL SPLGKDYHSE MDEEAQIQES VAQKQEPLRV
301: KSFQKKYSFA SKQQRRVIET RPQWSGGILD IWNDISQAYL SLFCTFCVFG WNMERLGFGN MYVHIATFML FCMAPFWIFI LAAVNIEDET VRQALVATGI
401: ILCLFGLLYG GFWRIQMRKR FNLPTYNFCF GKPSASDCTL WLCCCWCSLA QEVRTGNSYD IIEDKLCRKE VYSSDQQLMS PLPREDVASS KSGTSSPLGN
501: NSSPSMIKPS SPLNSSGFVK GYYSPERSLS TVKEEVPERS KDGTMNPPTP PSIQRESP
101: LDWVSLKKMC LEWFRDPMNI ALFVWILCVA ISGAILFLVM TGMLNAVLPR KSQRNAWFEV NNQILNALFT LMCLYQHPKR IYHLVLLCRW SPQDISRLRK
201: VYCKNGTYKP HEWAHMMVMV ILLNVNCFAQ YALCGLNLGY KRSDRPAIGV GICISFAIGA PAVAGLYSIL SPLGKDYHSE MDEEAQIQES VAQKQEPLRV
301: KSFQKKYSFA SKQQRRVIET RPQWSGGILD IWNDISQAYL SLFCTFCVFG WNMERLGFGN MYVHIATFML FCMAPFWIFI LAAVNIEDET VRQALVATGI
401: ILCLFGLLYG GFWRIQMRKR FNLPTYNFCF GKPSASDCTL WLCCCWCSLA QEVRTGNSYD IIEDKLCRKE VYSSDQQLMS PLPREDVASS KSGTSSPLGN
501: NSSPSMIKPS SPLNSSGFVK GYYSPERSLS TVKEEVPERS KDGTMNPPTP PSIQRESP
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.