Factsheet for Os05t0474900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 1
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0218200-00
Os05t0210600-01
Os05t0587300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10980.1	Os01t0218200-00	AT2G42580.1	19000166
AT3G10980.1	Os05t0210600-01	AT2G42580.1	19000166
AT3G10980.1	Os05t0587300-01	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G298700.1	Wheat	cytosol, nucleus, plasma membrane, plastid	76.71	75.62
HORVU1Hr1G070270.1	Barley	cytosol, peroxisome, plasma membrane	75.99	75.31
TraesCS1B01G308300.1	Wheat	cytosol, peroxisome, plasma membrane	76.17	75.09
EES19686	Sorghum	cytosol, nucleus, peroxisome	76.35	74.73
TraesCS1D01G292600.1	Wheat	cytosol, nucleus, plasma membrane, plastid	75.63	74.56
Zm00001d010607_P001	Maize	cytosol, nucleus, plasma membrane, plastid	75.09	73.63
Solyc06g048810.2.1	Tomato	plasma membrane	39.71	58.51
GSMUA_AchrUn_...	Banana	cytosol	57.4	58.14
CDX98836	Canola	plasma membrane	44.22	57.92
CDX70157	Canola	plasma membrane	44.22	56.45
Bra009106.1-P	Field mustard	plasma membrane	43.86	55.99
CDY70258	Canola	plastid	51.99	54.44
AT5G05350.1	Thale cress	cytosol, peroxisome, plasma membrane, plastid	51.26	53.99
CDY00984	Canola	plastid	50.54	53.64
PGSC0003DMT400017002	Potato	cytosol, nucleus, plasma membrane	53.79	53.5
AT3G10980.1	Thale cress	cytosol, peroxisome, plasma membrane	54.33	53.46
Bra029884.1-P	Field mustard	plastid	50.9	53.41
KRH73231	Soybean	nucleus	53.07	52.69
KRH31210	Soybean	cytosol	52.17	51.15
KRG97664	Soybean	cytosol, nucleus, peroxisome	48.74	50.09
Solyc06g048790.1.1	Tomato	cytosol, peroxisome, plasma membrane	45.31	49.7
Solyc06g048780.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	23.83	49.25
KRH65507	Soybean	plasma membrane	46.75	46.42
PGSC0003DMT400070946	Potato	plasma membrane	12.45	46.31
KRH76069	Soybean	peroxisome, plasma membrane, plastid, vacuole	30.69	44.85
VIT_13s0067g02190.t01	Wine grape	cytosol, peroxisome, plasma membrane	56.5	44.02
Os01t0825900-01	Rice	cytosol	32.85	34.67
Os03t0299800-01	Rice	mitochondrion	32.67	29.67
Os05t0341900-00	Rice	plasma membrane	27.8	29.56
Os11t0109700-02	Rice	plasma membrane	28.7	28.75
Os12t0109700-01	Rice	golgi, mitochondrion, plasma membrane	11.91	24.44
Os12t0109633-00	Rice	cytosol, nucleus, plasma membrane	20.4	24.41

Protein Annotations

EnsemblPlants:Os05t0474900-01	EnsemblPlantsGene:Os05g0474900	EntrezGene:4339093	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF2985	InterPro:PLAC_motif_containing	PANTHER:PTHR31045	PFAM:PF04749	PFAM:PF11204	ProteinID:AAU44247.1
ProteinID:BAF17743.1	ProteinID:BAS94521.1	ProteinID:EEE64075.1	RefSeq:XP_015640538.1	SEG:seg	TIGRFAMs:TIGR01571
TMHMM:TMhelix	UniParc:UPI000043F4CF	UniProt:Q65WW0	MapMan:35.2	:	:

Description

Protein of unknown function Cys-rich family protein. (Os05t0474900-01)

Coordinates

chr5:-:23317206..23319965

Molecular Weight (calculated)

62809.4 Da

IEP (calculated)

7.811

GRAVY (calculated)

-0.172

Length

554 amino acids

Sequence
(BLAST)

001: MVSNGNEDLK ADVELVESTT VDNDTGAPGA STLPTQGVPR QGKQRNGFLN FCNRFSSGDR FKKLGPSPSF KFRQLALERD EFSRSIHSDS HDNHEHFQFI
101: RKINWGHLWV MCKDWIKEPL NMALFAWIAC VTVSGAILFL VMTGMLNRAL PSKSQRDAWF EVNNQILNAL FTLMCLYQHP KRIYYFVLLC RWEQKDVLVL
201: RKTYCKNGTY KPNEWMHMMV VVVLLNLNCF AQYALCGLNL GYRRSERPPI GVGLTISVAI GAAAFAGLYN IISPLGKDYD TELTEVDQEA QTELTRPATS
301: RTSLEKRYSF IQSEERRFVE SRPEWVGGLM DFWDNISLAY LSIFCSCCVF GWNMQRLGFG NMYVHIATFM LFCLAPFFIF NLAAVNINNE NLREALGLTG
401: LALCFFGLLY GGFWRIQMRK RFNLPANNFC CRSAEATDCF QWLCCSSCSL AQEVRTADYY DIAEDRSYTE QITARSQHVM TPLSREDGLP LFRSNPGSPY
501: RSSTASPSIF IMESPSAPRR SPGPSPLGGS PTMGDRTMKA PTPSVLHRDG EPEL

Best Arabidopsis Sequence Match ( AT3G10980.1 )
(BLAST)

001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA

Arabidopsis Description

PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.