Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023227_P001 | Maize | plasma membrane | 48.6 | 45.09 |
| KXG22798 | Sorghum | cytosol, peroxisome, plasma membrane | 47.73 | 44.83 |
| TraesCS5A01G149900.1 | Wheat | cytosol, peroxisome, plasma membrane | 47.52 | 43.82 |
| TraesCS5D01G143100.1 | Wheat | cytosol, peroxisome, plasma membrane | 47.52 | 43.82 |
| TraesCS5B01G148500.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.87 | 43.14 |
| HORVU5Hr1G047240.2 | Barley | endoplasmic reticulum | 38.66 | 37.06 |
| GSMUA_Achr11P... | Banana | cytosol | 33.48 | 28.13 |
| Os01t0825900-01 | Rice | cytosol | 31.32 | 27.62 |
| Os03t0299800-01 | Rice | mitochondrion | 34.99 | 26.56 |
| Os05t0341900-00 | Rice | plasma membrane | 29.37 | 26.1 |
| Os11t0109700-02 | Rice | plasma membrane | 25.92 | 21.7 |
| Os12t0109700-01 | Rice | golgi, mitochondrion, plasma membrane | 12.1 | 20.74 |
| Os05t0474900-01 | Rice | plasma membrane | 24.41 | 20.4 |
Protein Annotations
| MapMan:35.2 | UniProt:A0A0P0Y616 | ProteinID:BAT15540.1 | ncoils:Coil | InterPro:DUF2985 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0009451 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0043231 | GO:GO:0090305 | EnsemblPlantsGene:Os12g0109633 | EnsemblPlants:Os12t0109633-00 | PFAM:PF11204 | PANTHER:PTHR31045 |
| PANTHER:PTHR31045:SF5 | TMHMM:TMhelix | UniParc:UPI000393AC1E | SEG:seg | : | : |
Description
Hypothetical conserved gene. (Os12t0109633-00)
Coordinates
chr12:-:521291..522682
Molecular Weight (calculated)
50768.7 Da
IEP (calculated)
11.954
GRAVY (calculated)
-0.191
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MESQEQHEDD AQHKQEQHKK HKEKERLLDF LRAAPSKTPW FSFSGAAFLT RLASLRTTNN PAASRRLPAF VRSVDWRALR AKCLAWAKHP MNAALLVWLA
101: FVAGGVAFVF LLMTGALNSA VPDASRRRRW TEVANQMLNA LFTIMCVYQH PKLCHHLALL LRWRAADVAE LRALYCKNGA AGLRRERLHV AVVVLLLHAT
201: CFAQYGYCAL FWFFGRDNRP DLAVNLCMAL GLGFPIVAAL YMVYGPLGRK IVLIPASTDD ENVKSQVDEA NAIAVTAQCD SNRNRAVVAK PEWAGGLFDV
301: GDDPTVARAV AVVHVLRVRV EHGAPGARQH VRARLHVRAA VRGAGAGVRG GRAQRPRRHA AVRRGRRGRL AVRAGPHVRR VLARADAEAL RAAGAPLVHV
401: RRAGNGGGLR QVAVLRAVRA GAGGEDDQPV RRGGGRAVRQ RWRGGGGGGG DGAFGERRLH RRR
101: FVAGGVAFVF LLMTGALNSA VPDASRRRRW TEVANQMLNA LFTIMCVYQH PKLCHHLALL LRWRAADVAE LRALYCKNGA AGLRRERLHV AVVVLLLHAT
201: CFAQYGYCAL FWFFGRDNRP DLAVNLCMAL GLGFPIVAAL YMVYGPLGRK IVLIPASTDD ENVKSQVDEA NAIAVTAQCD SNRNRAVVAK PEWAGGLFDV
301: GDDPTVARAV AVVHVLRVRV EHGAPGARQH VRARLHVRAA VRGAGAGVRG GRAQRPRRHA AVRRGRRGRL AVRAGPHVRR VLARADAEAL RAAGAPLVHV
401: RRAGNGGGLR QVAVLRAVRA GAGGEDDQPV RRGGGRAVRQ RWRGGGGGGG DGAFGERRLH RRR
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.