Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 1
- plastid 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G340900.1 | Wheat | cytosol, peroxisome, plasma membrane | 65.33 | 66.6 |
| TraesCS3B01G379000.1 | Wheat | cytosol, peroxisome, plasma membrane | 64.19 | 65.56 |
| EES01683 | Sorghum | cytosol, peroxisome, plasma membrane | 63.24 | 64.72 |
| TraesCS3A01G347300.1 | Wheat | plasma membrane | 66.1 | 61.42 |
| Zm00001d043026_P001 | Maize | cytosol, peroxisome, plasma membrane | 60.38 | 58.7 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plasma membrane | 45.52 | 47.33 |
| Os11t0109700-02 | Rice | plasma membrane | 44.0 | 41.77 |
| Os05t0341900-00 | Rice | plasma membrane | 39.81 | 40.12 |
| Os03t0299800-01 | Rice | mitochondrion | 40.38 | 34.75 |
| Os05t0474900-01 | Rice | plasma membrane | 34.67 | 32.85 |
| GSMUA_Achr5P28010_001 | Banana | cytosol, peroxisome, plasma membrane | 31.62 | 31.74 |
| Os12t0109700-01 | Rice | golgi, mitochondrion, plasma membrane | 16.19 | 31.48 |
| Os12t0109633-00 | Rice | cytosol, nucleus, plasma membrane | 27.62 | 31.32 |
| GSMUA_Achr11P... | Banana | nucleus | 43.24 | 24.23 |
Protein Annotations
| EMBL:AK101175 | EnsemblPlants:Os01t0825900-01 | EnsemblPlantsGene:Os01g0825900 | EntrezGene:4327516 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF6 | PFAM:PF04749 |
| PFAM:PF11204 | ProteinID:BAB61263.1 | ProteinID:BAF06587.1 | ProteinID:BAS75017.1 | RefSeq:XP_015621381.1 | SEG:seg |
| TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI00000A0621 | UniProt:Q94D92 | MapMan:35.2 | : |
Description
Protein of unknown function Cys-rich family protein. (Os01t0825900-01)
Coordinates
chr1:+:35328778..35331207
Molecular Weight (calculated)
57735.4 Da
IEP (calculated)
5.776
GRAVY (calculated)
0.117
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQNFPEDDM AGTPYSDQTS PILTEYHITV PALHDGSMQG SVHHERRLLD CLRATPSVEW LKNINLCSPL TNFRLPSTGV RRYLHVEVHF VRRINWSSVF
101: SFCKNWLKHP LNIALLAWLL CVAAAGGMLI LLLLGLLNRA FPSKPLRHHW IEIDNQILNA LFTLMSIYQH PSLIHHLVLL CRWRPEDAAE LRKVYCKNGD
201: RRPGERAHMS VVVALLHVTC ISQYVVCNLY WAYRSRSRSE FADNFFFVLG VVAPVVAGAY TVYSPLGRDT DDDASGEEAK QQQQHMIEAE LPGTRTVVVD
301: PVWAGGLLDC GEDPAACCLS SLCTFCVFGW NMERLGFGNM YVHTAMFLLL CVAPFWVFNI TALHIHDYDL SDAVGAAGIA LCFLGLLYGG FWRVQMRKRF
401: ALPGSRWCCG SASLTDYARW LFCWPCALAQ EVRTGNLYDV EDGGGVFYEK AMDGGDVEGG AASTAATGVV PVSVGGGEGD GVVGDIKLGM DGEMIPPAQA
501: VMETSGDTQG SGADVAANGD NELSS
101: SFCKNWLKHP LNIALLAWLL CVAAAGGMLI LLLLGLLNRA FPSKPLRHHW IEIDNQILNA LFTLMSIYQH PSLIHHLVLL CRWRPEDAAE LRKVYCKNGD
201: RRPGERAHMS VVVALLHVTC ISQYVVCNLY WAYRSRSRSE FADNFFFVLG VVAPVVAGAY TVYSPLGRDT DDDASGEEAK QQQQHMIEAE LPGTRTVVVD
301: PVWAGGLLDC GEDPAACCLS SLCTFCVFGW NMERLGFGNM YVHTAMFLLL CVAPFWVFNI TALHIHDYDL SDAVGAAGIA LCFLGLLYGG FWRVQMRKRF
401: ALPGSRWCCG SASLTDYARW LFCWPCALAQ EVRTGNLYDV EDGGGVFYEK AMDGGDVEGG AASTAATGVV PVSVGGGEGD GVVGDIKLGM DGEMIPPAQA
501: VMETSGDTQG SGADVAANGD NELSS
001: MGSVDEVEIS KTRVSCPPAL STSHKILISE EKPRRWSESS LPDVSNRIKL LKFGSPSARL KRMAEERDEV SRSVNSSSSS SHDVVSSRKI EWACLMKMGK
101: QWLQNPLNMV MFLWIFVVAV SGAILFMVMT GMLNHALPKK SQRDVWFEVN NQILNALFTL MCLYQHPKRF YHLVLLCRWK QDDVTTLRKI FCKNGTYKPN
201: EWIHMMVVVL LLHLNCFAQY ALCGLNLGYR RSERPAIGVA ICISFAIAAP TAAGLYTILS PLGKDYDPQG DEENQVQAVG EGPVSNRKLS LERRYSFASN
301: DVSNPEWREG VLDIWEDISL AYLSLFCTFC LFGWNMERIG FGNMYVHIAT FVLFCLAPFF IFNLAAINID NEMVRDALGY TGIVLCLFGL LYGGFWRIQM
401: RKRFKLPGYN ICCGRPAIAD CTLWLFCCWC SLAQEVRTAN SYEIVEDKFC KRREENSKID DEVVVSALPR EDGVFDPSCL PKKMTTTMIA SSTLSPSRQK
501: DETCLGEKGD EALSPPSPPF IHREAS
101: QWLQNPLNMV MFLWIFVVAV SGAILFMVMT GMLNHALPKK SQRDVWFEVN NQILNALFTL MCLYQHPKRF YHLVLLCRWK QDDVTTLRKI FCKNGTYKPN
201: EWIHMMVVVL LLHLNCFAQY ALCGLNLGYR RSERPAIGVA ICISFAIAAP TAAGLYTILS PLGKDYDPQG DEENQVQAVG EGPVSNRKLS LERRYSFASN
301: DVSNPEWREG VLDIWEDISL AYLSLFCTFC LFGWNMERIG FGNMYVHIAT FVLFCLAPFF IFNLAAINID NEMVRDALGY TGIVLCLFGL LYGGFWRIQM
401: RKRFKLPGYN ICCGRPAIAD CTLWLFCCWC SLAQEVRTAN SYEIVEDKFC KRREENSKID DEVVVSALPR EDGVFDPSCL PKKMTTTMIA SSTLSPSRQK
501: DETCLGEKGD EALSPPSPPF IHREAS
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q5XV52]
SUBAcon: [peroxisome,plastid,cytosol,plasma membrane]
SUBAcon: [peroxisome,plastid,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.