Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G379000.1 | Wheat | cytosol, peroxisome, plasma membrane | 90.49 | 90.66 |
| TraesCS3A01G347300.1 | Wheat | plasma membrane | 86.41 | 78.76 |
| EES01683 | Sorghum | cytosol, peroxisome, plasma membrane | 65.24 | 65.5 |
| Os01t0825900-01 | Rice | cytosol | 66.6 | 65.33 |
| Zm00001d043026_P001 | Maize | cytosol, peroxisome, plasma membrane | 60.39 | 57.59 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plasma membrane | 42.72 | 43.56 |
| TraesCS6D01G117700.1 | Wheat | plasma membrane | 38.45 | 39.36 |
| TraesCS5D01G143200.1 | Wheat | plasma membrane | 40.78 | 38.6 |
| TraesCS5D01G143100.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.48 | 38.45 |
| TraesCS4D01G189700.1 | Wheat | nucleus, peroxisome, plasma membrane | 39.03 | 35.7 |
| GSMUA_Achr5P28010_001 | Banana | cytosol, peroxisome, plasma membrane | 31.84 | 31.36 |
| TraesCS3D01G542600.1 | Wheat | plasma membrane | 33.4 | 30.18 |
| TraesCS1D01G292600.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 31.84 | 29.18 |
| GSMUA_Achr11P... | Banana | nucleus | 42.72 | 23.48 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G340900.1 | EnsemblPlantsGene:TraesCS3D01G340900 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF6 |
| PFAM:PF04749 | PFAM:PF11204 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr3D:+:454498040..454499587
Molecular Weight (calculated)
56785.9 Da
IEP (calculated)
6.301
GRAVY (calculated)
0.159
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHTIGVADD EIADIPCSDA SPILTEYHIT VPTLHDGLMQ GADQHERRLL DVLKATPSVQ WLKDINVCGP LGKIQLPSIG VHRYLHVHFI RTVDWSSLLA
101: ICKNHLKHPL NIALLIWLLC VAAAGAMLGL LLLGLLNKAF PSRALRHHWI EIDNQILNAL FTLMSIYQHP ILVHHLVLLC RWRPEDAAQL RKVYCKNGAR
201: RPNERAHMSF VVALLHVTCI SQYMECSLYW GYPSRSRSEL AENFFFILGV AAPVVAGAHA VYSPLGRDDD AAAASCEETK QLHAAGAEES PEEMTVVGNP
301: MWAGELLDCG EDPAACYLSF LCTFCVFGWN MERLGLGNMY MHTAMFLLLC VAPFWVFNVT ALSIHDYALS DAFGAAGVVL CFLGLLYGGF WRMQMRKRLG
401: LPRSRWCCGS SSLTDYAQWL LCWPCALAQE VRTANLYDPR GDGGFYGKLV DGGDPERGPD VPVSAEVQEV VGGVVNPTVD GEMIPPVQPV VESGRQRQAG
501: HEEIVANGSS VQLKS
101: ICKNHLKHPL NIALLIWLLC VAAAGAMLGL LLLGLLNKAF PSRALRHHWI EIDNQILNAL FTLMSIYQHP ILVHHLVLLC RWRPEDAAQL RKVYCKNGAR
201: RPNERAHMSF VVALLHVTCI SQYMECSLYW GYPSRSRSEL AENFFFILGV AAPVVAGAHA VYSPLGRDDD AAAASCEETK QLHAAGAEES PEEMTVVGNP
301: MWAGELLDCG EDPAACYLSF LCTFCVFGWN MERLGLGNMY MHTAMFLLLC VAPFWVFNVT ALSIHDYALS DAFGAAGVVL CFLGLLYGGF WRMQMRKRLG
401: LPRSRWCCGS SSLTDYAQWL LCWPCALAQE VRTANLYDPR GDGGFYGKLV DGGDPERGPD VPVSAEVQEV VGGVVNPTVD GEMIPPVQPV VESGRQRQAG
501: HEEIVANGSS VQLKS
001: MADLDKLEGG GGGGAVVIAD IRADEGGGAV EERERLTELE GISVLDFDLL CSTVALQTQG KWRKLESSEG EDATEDDYGG GVLRLWEGDV MDCFEDRHLC
101: IESACCPCYR FGKNMTRTGF GSCFLQGAVH MILIAGFLFN VVAFAVTKRH CFLYLAIAFV LLIGSYLGFF RMLIRRKFNI RGTDSFLDDF IHHLVCPFCT
201: LTQESKTLEM NNVHDGIWHG RGDTLCIGGY SEGKAFLELH SPPVIASTMS SSQP
101: IESACCPCYR FGKNMTRTGF GSCFLQGAVH MILIAGFLFN VVAFAVTKRH CFLYLAIAFV LLIGSYLGFF RMLIRRKFNI RGTDSFLDDF IHHLVCPFCT
201: LTQESKTLEM NNVHDGIWHG RGDTLCIGGY SEGKAFLELH SPPVIASTMS SSQP
Arabidopsis Description
At1g11380 [Source:UniProtKB/TrEMBL;Acc:Q8LFV5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.