Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G047230.1 | Barley | plasma membrane | 83.09 | 83.09 |
| TraesCS5B01G148400.1 | Wheat | plasma membrane | 67.83 | 68.08 |
| TraesCS5A01G149800.1 | Wheat | plasma membrane, plastid | 68.2 | 62.99 |
| Os11t0109700-02 | Rice | plasma membrane | 51.47 | 50.63 |
| Zm00001d023228_P001 | Maize | plasma membrane | 50.0 | 47.64 |
| KXG22799 | Sorghum | mitochondrion | 50.0 | 43.66 |
| TraesCS3D01G340900.1 | Wheat | cytosol, peroxisome, plasma membrane | 38.6 | 40.78 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plasma membrane | 36.4 | 39.21 |
| TraesCS5D01G143100.1 | Wheat | cytosol, peroxisome, plasma membrane | 34.93 | 37.85 |
| TraesCS6D01G117700.1 | Wheat | plasma membrane | 33.64 | 36.38 |
| TraesCS4D01G189700.1 | Wheat | nucleus, peroxisome, plasma membrane | 32.72 | 31.62 |
| TraesCS3D01G542600.1 | Wheat | plasma membrane | 30.51 | 29.12 |
| GSMUA_Achr5P28010_001 | Banana | cytosol, peroxisome, plasma membrane | 26.84 | 27.92 |
| TraesCS1D01G292600.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 27.57 | 26.69 |
| GSMUA_Achr11P... | Banana | nucleus | 36.21 | 21.02 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G143200.1 | EnsemblPlantsGene:TraesCS5D01G143200 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF6 |
| PFAM:PF04749 | PFAM:PF11204 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr5D:-:229145805..229147439
Molecular Weight (calculated)
58814.3 Da
IEP (calculated)
6.934
GRAVY (calculated)
0.242
Length
544 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLPRDSNGD AAAARAPLLA SYRVPLPPAD PLLDEPRRSE WLSFWRGGPT SEVDWGSVRA TCKEWIKHPM NIALLLWLLC VGASGGMLVL LLLGLLDRAF
101: PAPAARAHWV EVNNQVLNAL FTLMSLYQHP ALFHHVFLLC RWRLPGDAAE LRAAYCGKQG GGPPRRGERA HMAVVVALLH LTVVCQYALC WLYWGFTERS
201: RPELAEDGFF ALGVGAPVAA VVYTVRSPLG KDPCGDLAAC PDAASLGQRC PARAAHAVAV VEPEWAGGMF EFDCGGDAAA GCCLSLSCAF CVFGWNAERL
301: GFGNACVHAT TFALLCFAPL WVLGVTALRV HDVAVGDVVG GAGVLLCAGG LLYGGYWRIQ MRRKFRLPGS TVCCGSKSAT DYARWLFCWP CALAQEVRTA
401: SRYHIEGESF FHRKAAAAAT NDEPLLIGPH RIAIAASDHE GSSKSDGHLL VVVHDEMVPP PVVQVVVAGD DDTCGQCNAD RVEKKIEAID VVEEDGSSLL
501: ASNGEMVDHR LSGGRWRVEK VKRMINVVTM VSLLVLLYAR GFIF
101: PAPAARAHWV EVNNQVLNAL FTLMSLYQHP ALFHHVFLLC RWRLPGDAAE LRAAYCGKQG GGPPRRGERA HMAVVVALLH LTVVCQYALC WLYWGFTERS
201: RPELAEDGFF ALGVGAPVAA VVYTVRSPLG KDPCGDLAAC PDAASLGQRC PARAAHAVAV VEPEWAGGMF EFDCGGDAAA GCCLSLSCAF CVFGWNAERL
301: GFGNACVHAT TFALLCFAPL WVLGVTALRV HDVAVGDVVG GAGVLLCAGG LLYGGYWRIQ MRRKFRLPGS TVCCGSKSAT DYARWLFCWP CALAQEVRTA
401: SRYHIEGESF FHRKAAAAAT NDEPLLIGPH RIAIAASDHE GSSKSDGHLL VVVHDEMVPP PVVQVVVAGD DDTCGQCNAD RVEKKIEAID VVEEDGSSLL
501: ASNGEMVDHR LSGGRWRVEK VKRMINVVTM VSLLVLLYAR GFIF
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.