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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, nucleus, cytosol

Predictor Summary:
  • plastid 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane, plastid
Any Predictor:cytosol, nucleus, plasma membrane, plastid
ChloroP:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G427400.1
TraesCS1B01G462300.1
TraesCS1D01G437100.1
TraesCS3A01G143000.1
TraesCS3A01G221800.1
TraesCS3B01G162100.1
TraesCS3B01G251600.1
TraesCS3D01G144600.1
TraesCS3D01G231300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G10980.1 TraesCS1A01G427400.1 AT2G42580.1 19000166
AT3G10980.1 TraesCS1B01G462300.1 AT2G42580.1 19000166
AT3G10980.1 TraesCS1D01G437100.1 AT2G42580.1 19000166
AT3G10980.1 TraesCS3A01G143000.1 AT2G42580.1 19000166
AT3G10980.1 TraesCS3A01G221800.1 AT2G42580.1 19000166
AT3G10980.1 TraesCS3B01G162100.1 AT2G42580.1 19000166
AT3G10980.1 TraesCS3B01G251600.1 AT2G42580.1 19000166
AT3G10980.1 TraesCS3D01G144600.1 AT2G42580.1 19000166
AT3G10980.1 TraesCS3D01G231300.1 AT2G42580.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G298700.1 Wheat cytosol, nucleus, plasma membrane, plastid 95.91 95.91
TraesCS1B01G308300.1 Wheat cytosol, peroxisome, plasma membrane 92.88 92.88
HORVU1Hr1G070270.1 Barley cytosol, peroxisome, plasma membrane 88.97 89.45
Os05t0474900-01 Rice plasma membrane 74.56 75.63
EES19686 Sorghum cytosol, nucleus, peroxisome 69.93 69.43
Zm00001d010607_P001 Maize cytosol, nucleus, plasma membrane, plastid 68.51 68.14
CDX98836 Canola plasma membrane 43.59 57.92
CDX70157 Canola plasma membrane 43.77 56.68
Bra009106.1-P Field mustard plasma membrane 43.42 56.22
GSMUA_AchrUn_... Banana cytosol 54.63 56.12
Solyc06g048810.2.1 Tomato plasma membrane 37.54 56.12
CDY70258 Canola plastid 51.25 54.44
CDY00984 Canola plastid 50.18 54.02
PGSC0003DMT400017002 Potato cytosol, nucleus, plasma membrane 53.02 53.5
Bra029884.1-P Field mustard plastid 50.18 53.41
AT3G10980.1 Thale cress cytosol, peroxisome, plasma membrane 53.38 53.29
AT5G05350.1 Thale cress cytosol, peroxisome, plasma membrane, plastid 49.47 52.85
KRH73231 Soybean nucleus 49.82 50.18
KRH31210 Soybean cytosol 50.18 49.91
KRG97664 Soybean cytosol, nucleus, peroxisome 45.91 47.87
Solyc06g048790.1.1 Tomato cytosol, peroxisome, plasma membrane 42.88 47.72
Solyc06g048780.1.1 Tomato cytosol, nucleus, plasma membrane, plastid 22.42 47.01
TraesCS3D01G542600.1 Wheat plasma membrane 46.09 45.44
KRH76069 Soybean peroxisome, plasma membrane, plastid, vacuole 29.89 44.33
PGSC0003DMT400070946 Potato plasma membrane 11.74 44.3
KRH65507 Soybean plasma membrane 43.95 44.27
VIT_13s0067g02190.t01 Wine grape cytosol, peroxisome, plasma membrane 53.56 42.33
TraesCS4D01G189700.1 Wheat nucleus, peroxisome, plasma membrane 32.38 32.33
TraesCS3D01G340900.1 Wheat cytosol, peroxisome, plasma membrane 29.18 31.84
TraesCS5D01G143100.1 Wheat cytosol, peroxisome, plasma membrane 27.4 30.68
TraesCS6D01G117700.1 Wheat plasma membrane 25.44 28.43
TraesCS5D01G143200.1 Wheat plasma membrane 26.69 27.57
Protein Annotations
EnsemblPlants:TraesCS1D01G292600.1EnsemblPlantsGene:TraesCS1D01G292600InterPro:DUF2985InterPro:PLAC_motif_containingPANTHER:PTHR31045PFAM:PF04749
PFAM:PF11204TIGRFAMs:TIGR01571TMHMM:TMhelixMapMan:35.2::
Description
No Description!
Coordinates
chr1D:+:391740572..391742260
Molecular Weight (calculated)
63051.4 Da
IEP (calculated)
8.044
GRAVY (calculated)
-0.175
Length
562 amino acids
Sequence
(BLAST)
001: MVPNGNGNLK ADIQQVESKT SENDPGATDV NTLSTQNVSK QGNQRSGCLN FVNRFSSGAH FKKLGPSPSV KFRQLALQRD DFSRSIHSDN HDNHEHFRLI
101: RKINWGHLWA MGKDWIRQPL NMALFVWIAV VSVSGAILFM VMTGMLNHAL PSKSERDAWF EVNNQILNAL FTLMCLYQHP MRIYNFVLLC RWDQKDILRL
201: RKEYCKNGTY KPNEWMHMMV VVVFLNLNCF AQYALCGLNI GYRRSERPPL GVAVTISFAF GAALFASVYN IVSPLGKDYD AEVREGDPEA QAGVTSTEGA
301: RAATSGRSLE RRYSFLQSEE RRFVESRPEW VGGLSDFWDS ITIAYLSIFC SCCVFGWNVQ RLGFGNMYVH IATFLLFCLA PFFIFNLAAV NINNETLREA
401: LGLTGIALCF FGLLYGGFWR IQMRKRFNLP GNPFCCCNPD VTDCFQWLCC CSCSLAQEVR TADYYDIAEE RSYRGQVNGE SQRVMSPLAR EDGLPLFKST
501: PASPYRSSTG TAGQSIFIME SPSAPRRSSG ATPLGASPTN GGDRAMKAPA PSVLHREGED ES
Best Arabidopsis Sequence Match ( AT3G10980.1 )
(BLAST)
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.