Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G156100.1 | Wheat | plasma membrane | 90.46 | 90.46 |
| TraesCS6A01G127700.1 | Wheat | peroxisome, plasma membrane, vacuole | 89.66 | 89.66 |
| HORVU6Hr1G024570.1 | Barley | plasma membrane | 78.73 | 80.49 |
| EES18024 | Sorghum | cytosol, nucleus, plasma membrane | 51.09 | 50.39 |
| Zm00001d038030_P001 | Maize | cytosol, nucleus, plasma membrane | 51.89 | 49.9 |
| Os05t0341900-00 | Rice | plasma membrane | 49.7 | 47.98 |
| TraesCS3D01G340900.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.36 | 38.45 |
| TraesCS5D01G143100.1 | Wheat | cytosol, peroxisome, plasma membrane | 36.98 | 37.05 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plasma membrane | 34.0 | 33.86 |
| TraesCS5D01G143200.1 | Wheat | plasma membrane | 36.38 | 33.64 |
| TraesCS4D01G189700.1 | Wheat | nucleus, peroxisome, plasma membrane | 35.39 | 31.62 |
| TraesCS3D01G542600.1 | Wheat | plasma membrane | 30.42 | 26.84 |
| TraesCS1D01G292600.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 28.43 | 25.44 |
| GSMUA_Achr5P28010_001 | Banana | cytosol, peroxisome, plasma membrane | 25.45 | 24.47 |
| GSMUA_Achr11P... | Banana | nucleus | 32.6 | 17.5 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G117700.1 | EnsemblPlantsGene:TraesCS6D01G117700 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF8 |
| PFAM:PF04749 | PFAM:PF11204 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr6D:+:83425507..83427133
Molecular Weight (calculated)
54728.2 Da
IEP (calculated)
8.494
GRAVY (calculated)
-0.001
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLRGHPTA AAHAKVEPEA ELGERNSAPA VNPVVGQEAR GPMAGDRRTR PERVRRLIRR LRPAPIGSAF KRWLKHPAHV AQFAWAVCVA LSFALLGLLL
101: LGVFDGAFRR RSVRDRWVEI VNQILNALFT LMTIYQHPEL FHHAALLLRW RPGDEKELRK AYCRKGSGAG EVQRERLHLS VVVGLLHLTC FAQYAVCGLF
201: WGYSSAARPD AAMTTLAGAS GVAPVVAGLY MYLSPLGRKS EQSMHQEPEQ VCDDDDSMVV AVIADPAGRE WAGGLLDVRD DPAACWLSCL CTFCVFGWNM
301: ERLGFGNMHV HGAMFALLCF APLWVLNHAA TNIRSKAVSN AVSAAGVVLC VLGLLYGGFW RARMRRKFGL AGKNRLPFFS SLSLDVADYL QWVFCWGCAL
401: AQEVRTGNLL LDVESTGGID PRGSGGVQVD NSLRPLPRED GSFEIAAVAG AHSVPLADNS AGRGEELPLV QLKRDGSSSP GEMRPPVPPL MQDGGGPQGP
501: RIQ
101: LGVFDGAFRR RSVRDRWVEI VNQILNALFT LMTIYQHPEL FHHAALLLRW RPGDEKELRK AYCRKGSGAG EVQRERLHLS VVVGLLHLTC FAQYAVCGLF
201: WGYSSAARPD AAMTTLAGAS GVAPVVAGLY MYLSPLGRKS EQSMHQEPEQ VCDDDDSMVV AVIADPAGRE WAGGLLDVRD DPAACWLSCL CTFCVFGWNM
301: ERLGFGNMHV HGAMFALLCF APLWVLNHAA TNIRSKAVSN AVSAAGVVLC VLGLLYGGFW RARMRRKFGL AGKNRLPFFS SLSLDVADYL QWVFCWGCAL
401: AQEVRTGNLL LDVESTGGID PRGSGGVQVD NSLRPLPRED GSFEIAAVAG AHSVPLADNS AGRGEELPLV QLKRDGSSSP GEMRPPVPPL MQDGGGPQGP
501: RIQ
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.