Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G117700.1 | Wheat | plasma membrane | 89.66 | 89.66 |
| TraesCS6B01G156100.1 | Wheat | plasma membrane | 88.67 | 88.67 |
| HORVU6Hr1G024570.1 | Barley | plasma membrane | 78.13 | 79.88 |
| EES18024 | Sorghum | cytosol, nucleus, plasma membrane | 51.69 | 50.98 |
| Zm00001d038030_P001 | Maize | cytosol, nucleus, plasma membrane | 52.49 | 50.48 |
| Os05t0341900-00 | Rice | plasma membrane | 50.1 | 48.37 |
| TraesCS5A01G149900.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.38 | 37.45 |
| TraesCS3A01G347300.1 | Wheat | plasma membrane | 40.16 | 35.75 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plasma membrane | 33.8 | 33.66 |
| TraesCS4A01G115700.1 | Wheat | nucleus, peroxisome, plasma membrane | 36.38 | 32.28 |
| TraesCS5A01G149800.1 | Wheat | plasma membrane, plastid | 35.39 | 30.22 |
| TraesCS1A01G298700.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 28.83 | 25.8 |
| TraesCS3A01G537100.1 | Wheat | cytosol, nucleus, plasma membrane | 30.22 | 24.88 |
| GSMUA_Achr5P28010_001 | Banana | cytosol, peroxisome, plasma membrane | 25.25 | 24.28 |
| GSMUA_Achr11P... | Banana | nucleus | 33.2 | 17.82 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G127700.1 | EnsemblPlantsGene:TraesCS6A01G127700 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF8 |
| PFAM:PF04749 | PFAM:PF11204 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr6A:-:100652013..100653524
Molecular Weight (calculated)
54897.5 Da
IEP (calculated)
8.824
GRAVY (calculated)
-0.006
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLRGHHTA AAHAKAELGE RNSGPAVNPV VGQEARGPVT GERRSRPERV RRLIRRLRPA PIGSAFKRWL KHPAHLAQFA WAVCVALTFA LLGLLLLGVF
101: DGAFRRRSVR DRWVEIVNQI LNALFTLMTI YQHPELFHHA ALLLRWRPGD EKELRKAYCR KGSGGGEVPR ERLHLSVVVG LLHLTCFAQY AVCALFWGYS
201: STARPDAAMT PLAGVSAVAP VVAGLYMYHS PLGRKSEQSM HQEAEEVCDD DDSMVVVAVI ADPAGREWAG GLLDVRDDPA ACWLSCLCTF CVFGWNMERL
301: GFGNMHVHGA MFALLCFAPL WVLNHAATNI RSKAVSNAVS AAGVVLCALG LLYGGFWRAR MRRKFGLAGK YNRLPFFSRL SLDVADYLQW MFCWGCALAQ
401: EVRTGNLLLD VESTGGISPQ GSGGAQVDSS SSLRPLPRED GSFEIAAVAG APYVPLADNS PRRGEELPLV QLKRDGISSS GEMRPPVPPL MQDGGGPQGG
501: RIQ
101: DGAFRRRSVR DRWVEIVNQI LNALFTLMTI YQHPELFHHA ALLLRWRPGD EKELRKAYCR KGSGGGEVPR ERLHLSVVVG LLHLTCFAQY AVCALFWGYS
201: STARPDAAMT PLAGVSAVAP VVAGLYMYHS PLGRKSEQSM HQEAEEVCDD DDSMVVVAVI ADPAGREWAG GLLDVRDDPA ACWLSCLCTF CVFGWNMERL
301: GFGNMHVHGA MFALLCFAPL WVLNHAATNI RSKAVSNAVS AAGVVLCALG LLYGGFWRAR MRRKFGLAGK YNRLPFFSRL SLDVADYLQW MFCWGCALAQ
401: EVRTGNLLLD VESTGGISPQ GSGGAQVDSS SSLRPLPRED GSFEIAAVAG APYVPLADNS PRRGEELPLV QLKRDGISSS GEMRPPVPPL MQDGGGPQGG
501: RIQ
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.