Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G143100.1 | Wheat | cytosol, peroxisome, plasma membrane | 99.2 | 99.2 |
| TraesCS5B01G148500.1 | Wheat | cytosol, peroxisome, plasma membrane | 97.01 | 96.82 |
| HORVU5Hr1G047240.2 | Barley | endoplasmic reticulum | 69.12 | 71.84 |
| Zm00001d023227_P001 | Maize | plasma membrane | 61.16 | 61.52 |
| KXG22798 | Sorghum | cytosol, peroxisome, plasma membrane | 60.16 | 61.26 |
| Os12t0109633-00 | Rice | cytosol, nucleus, plasma membrane | 43.82 | 47.52 |
| TraesCS4A01G115700.1 | Wheat | nucleus, peroxisome, plasma membrane | 43.03 | 38.1 |
| TraesCS6A01G127700.1 | Wheat | peroxisome, plasma membrane, vacuole | 37.45 | 37.38 |
| GSMUA_Achr11P... | Banana | cytosol | 40.24 | 36.66 |
| TraesCS3A01G347300.1 | Wheat | plasma membrane | 38.84 | 34.51 |
| TraesCS5A01G149800.1 | Wheat | plasma membrane, plastid | 36.85 | 31.41 |
| TraesCS1A01G298700.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 30.28 | 27.05 |
| TraesCS3A01G537100.1 | Wheat | cytosol, nucleus, plasma membrane | 32.27 | 26.51 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G149900.1 | EnsemblPlantsGene:TraesCS5A01G149900 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF5 |
| PFAM:PF04749 | PFAM:PF11204 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr5A:+:327725716..327727447
Molecular Weight (calculated)
54880.7 Da
IEP (calculated)
8.936
GRAVY (calculated)
0.104
Length
502 amino acids
Sequence
(BLAST)
(BLAST)
001: MESQERSPKA KEAHADDGIT IAELPSPRPG EGPKKERLLD FLRAAPSKGA VLARVASLRT RAAYSNFLRS PPVARAVDWR RVRDRGVAWA RHPMNAALLV
101: WFAFVAAGVV FVLLLMVGAL DSDVPDASRR RRWTEVANQM LNALFTIMCV YQHPRLCHHL ALLLRWRAPA DVAELRAVYC KNCAGGVRRE RLHVAVVVLL
201: LHATCFAQYA YCALFWLFRN DRRPGWAVNL LMALGSGTPV VAGLYMVYGP LGQKIALPDS VDEEAATVKE SAVARYDRTG SGRVVVSKPE WAGGLFDLAD
301: DPTVAAMSLS CTFCVFGWNM ERLGLGNMYV HAFTFALLCA APLLVFAVAA LSIRDATLGY LVGAAGALLS VLGLTYGGFW RTRMRKRFGL PADDRFCAPV
401: CGGRRTTVAA ADYAKWLFCA PCALAQEVRT GNFYDVEGDG LYVKGEGGVE EERRPAMAPL EREGSLAALM EAEKTGERLH APPVPMRVET RDKGSTSICT
501: SV
101: WFAFVAAGVV FVLLLMVGAL DSDVPDASRR RRWTEVANQM LNALFTIMCV YQHPRLCHHL ALLLRWRAPA DVAELRAVYC KNCAGGVRRE RLHVAVVVLL
201: LHATCFAQYA YCALFWLFRN DRRPGWAVNL LMALGSGTPV VAGLYMVYGP LGQKIALPDS VDEEAATVKE SAVARYDRTG SGRVVVSKPE WAGGLFDLAD
301: DPTVAAMSLS CTFCVFGWNM ERLGLGNMYV HAFTFALLCA APLLVFAVAA LSIRDATLGY LVGAAGALLS VLGLTYGGFW RTRMRKRFGL PADDRFCAPV
401: CGGRRTTVAA ADYAKWLFCA PCALAQEVRT GNFYDVEGDG LYVKGEGGVE EERRPAMAPL EREGSLAALM EAEKTGERLH APPVPMRVET RDKGSTSICT
501: SV
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.