Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G149900.1 | Wheat | cytosol, peroxisome, plasma membrane | 71.84 | 69.12 |
| TraesCS5D01G143100.1 | Wheat | cytosol, peroxisome, plasma membrane | 71.64 | 68.92 |
| TraesCS5B01G148500.1 | Wheat | cytosol, peroxisome, plasma membrane | 71.64 | 68.79 |
| KXG22798 | Sorghum | cytosol, peroxisome, plasma membrane | 54.04 | 52.94 |
| Zm00001d023227_P001 | Maize | plasma membrane | 54.24 | 52.51 |
| Os12t0109633-00 | Rice | cytosol, nucleus, plasma membrane | 37.06 | 38.66 |
| HORVU4Hr1G054940.1 | Barley | cytosol | 38.72 | 32.69 |
| HORVU6Hr1G024570.1 | Barley | plasma membrane | 32.71 | 32.11 |
| GSMUA_Achr11P... | Banana | cytosol | 36.02 | 31.58 |
| HORVU5Hr1G047230.1 | Barley | plasma membrane | 31.68 | 28.12 |
| HORVU1Hr1G070270.1 | Barley | cytosol, peroxisome, plasma membrane | 27.95 | 24.15 |
| HORVU3Hr1G117910.1 | Barley | cytosol, nucleus, plasma membrane | 28.57 | 22.55 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G047240.2 | EnsemblPlantsGene:HORVU5Hr1G047240 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF2985 |
| InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF5 | PFAM:PF04749 | PFAM:PF11204 | SEG:seg |
| TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI000B482CC0 | UniProt:A0A287R2W0 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr5H:-:367522712..367524386
Molecular Weight (calculated)
45828.7 Da
IEP (calculated)
8.040
GRAVY (calculated)
0.177
Length
483 amino acids
Sequence
(BLAST)
(BLAST)
001: KEAHVGDGIT VAELPNPRPG EGPKKERLLD FLRAAPSKGA VLARVASVRT RAAYSNFLRS PGFARAVDWR GVRDRGVAWA RHPMNAALLV WFSFVAAGMA
101: FVFLLMVGAL DSDVPDASRR RRWTXXXXXX XXXXXXXXXX XXXXXXXXXX XXLLRWRAPA DVAELRAVYC KNCAGGIRRE RLHVAVVVLL LHATCFAQYA
201: YCALFWLFPN DRRPSWAINL LMALGFGTPI VAGLYMVYGP LGQKIALPDS GDEESXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXG LFDLADDPTV
301: AAVSLSCTFC VFGWNMERLG LGNMYLHAFT FALLCAAPLL VFAVAALSIG DATLGYLVGA AGALLSVLGL TYGGFWRARM RKRFGLPADD RFCTPVCGGG
401: AAAADYVKWL FCAPCALAQE VRTGNFYDVE DDGLYVKGEG GEEEERRLAM VPLEREGSLA ALMEAEKTGE RLHAPPVPMR VET
101: FVFLLMVGAL DSDVPDASRR RRWTXXXXXX XXXXXXXXXX XXXXXXXXXX XXLLRWRAPA DVAELRAVYC KNCAGGIRRE RLHVAVVVLL LHATCFAQYA
201: YCALFWLFPN DRRPSWAINL LMALGFGTPI VAGLYMVYGP LGQKIALPDS GDEESXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXG LFDLADDPTV
301: AAVSLSCTFC VFGWNMERLG LGNMYLHAFT FALLCAAPLL VFAVAALSIG DATLGYLVGA AGALLSVLGL TYGGFWRARM RKRFGLPADD RFCTPVCGGG
401: AAAADYVKWL FCAPCALAQE VRTGNFYDVE DDGLYVKGEG GEEEERRLAM VPLEREGSLA ALMEAEKTGE RLHAPPVPMR VET
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.