Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G188300.1 | Wheat | plasma membrane | 80.42 | 85.66 |
| TraesCS4D01G189700.1 | Wheat | nucleus, peroxisome, plasma membrane | 81.82 | 83.13 |
| TraesCS4A01G115700.1 | Wheat | nucleus, peroxisome, plasma membrane | 80.59 | 81.31 |
| TraesCS1B01G115100.1 | Wheat | nucleus, peroxisome, plasma membrane | 77.97 | 78.66 |
| Zm00001d028809_P001 | Maize | nucleus, peroxisome, plasma membrane | 65.73 | 66.67 |
| Os03t0299800-01 | Rice | mitochondrion | 69.93 | 65.57 |
| EER92399 | Sorghum | cytosol, nucleus, plasma membrane | 65.73 | 65.51 |
| HORVU5Hr1G047240.2 | Barley | endoplasmic reticulum | 32.69 | 38.72 |
| GSMUA_Achr7P22250_001 | Banana | endoplasmic reticulum, plasma membrane | 11.54 | 37.5 |
| GSMUA_Achr7P22270_001 | Banana | endoplasmic reticulum, plasma membrane | 11.36 | 36.93 |
| HORVU6Hr1G024570.1 | Barley | plasma membrane | 31.12 | 36.18 |
| HORVU5Hr1G047230.1 | Barley | plasma membrane | 31.47 | 33.09 |
| HORVU1Hr1G070270.1 | Barley | cytosol, peroxisome, plasma membrane | 30.59 | 31.31 |
| HORVU3Hr1G117910.1 | Barley | cytosol, nucleus, plasma membrane | 31.99 | 29.9 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G054940.1 | EnsemblPlantsGene:HORVU4Hr1G054940 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF5 |
| PFAM:PF04749 | PFAM:PF11204 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr4H:-:460391709..460393706
Molecular Weight (calculated)
64345.6 Da
IEP (calculated)
8.554
GRAVY (calculated)
-0.151
Length
572 amino acids
Sequence
(BLAST)
(BLAST)
001: XEREREMVPN DANRGGEIVE VVVGEPASPS ATMRLIDFIP IYIPTVEKGA LSRSARKRRF LDFLRARPSK EWFLRSTFVG RLRRRSQVTA GEDDRDCDDS
101: TGGCRPRRRR RFRVPFVRKI RWGKLWTHAV SWCRRPANFA MIIWLAFVAA GLLLLFLLMT GMLDNAIPED DRRKKWTEVI NQILNALFTI MCLYQHPRIF
201: HHLWLLLRWR PAPDGDRDAI RKVYCKEGAP VPPHDRAHML VVVALLHITC LAQYFCCALF WSFSRSDRPN WALNIGYGFG TGFPVIAALY LAYSPLGRKQ
301: ARDPDAEPSS SGEEANGHGS RDVEIRIYNR SVVVSSPEWS GGLCDCCDDG TVCALSATCT FCVFGWNMER LGFGNMYVHA FTFILLCIAP LLIFSVTALN
401: VHDDDVRDTV LAVGVLLCFC GFLYGGYWRT QMRRRYKLPA GGGGRRAAVG DCARWLFCWS CALAQEVRTA NFYDFDDDRL VGHGARNEEG RAVLVPLPRE
501: ASTTHSRSLS CPPKIDAMAA ALGGAGTSAA DEQMAVIAME RSATYNGYGE SRDRQHGMRP PLPPLIQMDR EE
101: TGGCRPRRRR RFRVPFVRKI RWGKLWTHAV SWCRRPANFA MIIWLAFVAA GLLLLFLLMT GMLDNAIPED DRRKKWTEVI NQILNALFTI MCLYQHPRIF
201: HHLWLLLRWR PAPDGDRDAI RKVYCKEGAP VPPHDRAHML VVVALLHITC LAQYFCCALF WSFSRSDRPN WALNIGYGFG TGFPVIAALY LAYSPLGRKQ
301: ARDPDAEPSS SGEEANGHGS RDVEIRIYNR SVVVSSPEWS GGLCDCCDDG TVCALSATCT FCVFGWNMER LGFGNMYVHA FTFILLCIAP LLIFSVTALN
401: VHDDDVRDTV LAVGVLLCFC GFLYGGYWRT QMRRRYKLPA GGGGRRAAVG DCARWLFCWS CALAQEVRTA NFYDFDDDRL VGHGARNEEG RAVLVPLPRE
501: ASTTHSRSLS CPPKIDAMAA ALGGAGTSAA DEQMAVIAME RSATYNGYGE SRDRQHGMRP PLPPLIQMDR EE
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.