Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G115700.1 | Wheat | nucleus, peroxisome, plasma membrane | 92.01 | 91.36 |
| TraesCS1B01G115100.1 | Wheat | nucleus, peroxisome, plasma membrane | 91.3 | 90.65 |
| TraesCS4B01G188300.1 | Wheat | plasma membrane | 82.42 | 86.41 |
| HORVU4Hr1G054940.1 | Barley | cytosol | 83.13 | 81.82 |
| EER92399 | Sorghum | cytosol, nucleus, plasma membrane | 68.21 | 66.9 |
| Zm00001d028809_P001 | Maize | nucleus, peroxisome, plasma membrane | 66.96 | 66.84 |
| Os03t0299800-01 | Rice | mitochondrion | 70.52 | 65.08 |
| TraesCS5D01G143100.1 | Wheat | cytosol, peroxisome, plasma membrane | 38.54 | 43.23 |
| TraesCS3D01G340900.1 | Wheat | cytosol, peroxisome, plasma membrane | 35.7 | 39.03 |
| GSMUA_Achr7P22250_001 | Banana | endoplasmic reticulum, plasma membrane | 11.72 | 37.5 |
| GSMUA_Achr7P22270_001 | Banana | endoplasmic reticulum, plasma membrane | 11.55 | 36.93 |
| TraesCS6D01G117700.1 | Wheat | plasma membrane | 31.62 | 35.39 |
| TraesCS3D01G542600.1 | Wheat | plasma membrane | 33.39 | 32.98 |
| TraesCS5D01G143200.1 | Wheat | plasma membrane | 31.62 | 32.72 |
| TraesCS1D01G292600.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 32.33 | 32.38 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G189700.1 | EnsemblPlantsGene:TraesCS4D01G189700 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF5 |
| PFAM:PF04749 | PFAM:PF11204 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr4D:+:329300529..329302220
Molecular Weight (calculated)
62944.3 Da
IEP (calculated)
8.836
GRAVY (calculated)
-0.041
Length
563 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPNAASRGG EIVEVVVGEP ASPSAAMRLM DFIPIYIPTV EKGALSRGAR KTRFLDFLRA RPSKEWFLRS TFVGRLRCRS QVTAREDEDG RDSDGNAGGC
101: RPRRRRRRFR VPFVRKIRWG KLWTHAVSWC RRPANFAMII WLAFVAAGLL LLFLLMTGLL DDAIPEDDRR KKWTEVINQI LNALFTIMCL YQHPRIFHHL
201: VLLLRWRPDG DREAIRKVYC KEGAPVPPRD RAHMLVVVAL LHITCLAQYF CCALFWSYSR TDRPNWALNI GYGFGTGLPV IAALYLAYSP LGRKQARDPD
301: AEPSSSGEEA SGHGTAPEND GRGVSIRIYN RSVVVSRPEW SGGLCDCCDD GTVCALSATC TFCVFGWNME RLGFGNMYVH AFTFILLCVA PLLIFSVTAL
401: NVYDDDIRDA VVAVGVLLCF CGFLYGGYWR TQMRKRYKLP AAGGGRRAAV GDCAKWLFCW SCALAQEVRT ANFYDFDDDR FVGHGARNEE GRAVLVPLPR
501: EASTSTHSRS LSCPPKIYAM AALSGAGTST LDEQMVDIAM GRSATYNAMS PPLPPMIQMD REV
101: RPRRRRRRFR VPFVRKIRWG KLWTHAVSWC RRPANFAMII WLAFVAAGLL LLFLLMTGLL DDAIPEDDRR KKWTEVINQI LNALFTIMCL YQHPRIFHHL
201: VLLLRWRPDG DREAIRKVYC KEGAPVPPRD RAHMLVVVAL LHITCLAQYF CCALFWSYSR TDRPNWALNI GYGFGTGLPV IAALYLAYSP LGRKQARDPD
301: AEPSSSGEEA SGHGTAPEND GRGVSIRIYN RSVVVSRPEW SGGLCDCCDD GTVCALSATC TFCVFGWNME RLGFGNMYVH AFTFILLCVA PLLIFSVTAL
401: NVYDDDIRDA VVAVGVLLCF CGFLYGGYWR TQMRKRYKLP AAGGGRRAAV GDCAKWLFCW SCALAQEVRT ANFYDFDDDR FVGHGARNEE GRAVLVPLPR
501: EASTSTHSRS LSCPPKIYAM AALSGAGTST LDEQMVDIAM GRSATYNAMS PPLPPMIQMD REV
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.