Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G189700.1 | Wheat | nucleus, peroxisome, plasma membrane | 91.36 | 92.01 |
| TraesCS1B01G115100.1 | Wheat | nucleus, peroxisome, plasma membrane | 87.83 | 87.83 |
| TraesCS4B01G188300.1 | Wheat | plasma membrane | 79.89 | 84.36 |
| HORVU4Hr1G054940.1 | Barley | cytosol | 81.31 | 80.59 |
| Zm00001d028809_P001 | Maize | nucleus, peroxisome, plasma membrane | 67.55 | 67.91 |
| EER92399 | Sorghum | cytosol, nucleus, plasma membrane | 67.72 | 66.9 |
| Os03t0299800-01 | Rice | mitochondrion | 69.84 | 64.92 |
| TraesCS5A01G149900.1 | Wheat | cytosol, peroxisome, plasma membrane | 38.1 | 43.03 |
| GSMUA_Achr7P22250_001 | Banana | endoplasmic reticulum, plasma membrane | 11.82 | 38.07 |
| GSMUA_Achr7P22270_001 | Banana | endoplasmic reticulum, plasma membrane | 11.64 | 37.5 |
| TraesCS6A01G127700.1 | Wheat | peroxisome, plasma membrane, vacuole | 32.28 | 36.38 |
| TraesCS3A01G347300.1 | Wheat | plasma membrane | 34.74 | 34.87 |
| TraesCS1A01G298700.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 30.86 | 31.14 |
| TraesCS3A01G537100.1 | Wheat | cytosol, nucleus, plasma membrane | 33.16 | 30.77 |
| TraesCS5A01G149800.1 | Wheat | plasma membrane, plastid | 30.69 | 29.54 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G115700.1 | EnsemblPlantsGene:TraesCS4A01G115700 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF5 |
| PFAM:PF04749 | PFAM:PF11204 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr4A:-:140771987..140773690
Molecular Weight (calculated)
62911.1 Da
IEP (calculated)
8.621
GRAVY (calculated)
-0.052
Length
567 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPNDAASRG GEIVEVVVGE PASPSAAMRL MDFIPIYIPT VEKGALSRGA RKTRFLDFLR ARPSKEWFLR STFVGRLRRR SQVTAGEDED GPDSDGNAGG
101: CRPRRRRRFR VPFVRKIRWG KLWTHAVSWC RRPANFGMII WLAFVAAGLL LLFLLMTGLL DDAIPGDERR KKWSEVINQI LNALFTIMCL YQHPRIFHHL
201: VLLLRWRPDG DCEAIRKVYC KEGAPVPPRD RAHMLVVVAL LHITCLAQYF CCALFWSYSR TDRPNWALNI GYGFGTGLPV VAALYLAYSP LGRKQARDPD
301: AGPSSSGEEA SRHGGAPEND GRGVAIRIYN RSVVVSRPEW SGGLCDCCDD GTVCALSATC TFCVFGWNME RLGFGNMYVH AFTFILLCVA PLLIFSVTAL
401: NVHDDDIRDA VVAVGVLLCF CGFLYGGYWR TQMRKRYKLP AGGGGRRAAV GDCAKWFFCW SCALAQEVRT ANFYDFDDDR FVGHGARNEE GRAVLVPLPR
501: EAATSTHSRS LSCPPKIDAM AALGGAGTGA LDEQMVDVAM GRSATYNGYG DAMRPPLPPL IQMDREE
101: CRPRRRRRFR VPFVRKIRWG KLWTHAVSWC RRPANFGMII WLAFVAAGLL LLFLLMTGLL DDAIPGDERR KKWSEVINQI LNALFTIMCL YQHPRIFHHL
201: VLLLRWRPDG DCEAIRKVYC KEGAPVPPRD RAHMLVVVAL LHITCLAQYF CCALFWSYSR TDRPNWALNI GYGFGTGLPV VAALYLAYSP LGRKQARDPD
301: AGPSSSGEEA SRHGGAPEND GRGVAIRIYN RSVVVSRPEW SGGLCDCCDD GTVCALSATC TFCVFGWNME RLGFGNMYVH AFTFILLCVA PLLIFSVTAL
401: NVHDDDIRDA VVAVGVLLCF CGFLYGGYWR TQMRKRYKLP AGGGGRRAAV GDCAKWFFCW SCALAQEVRT ANFYDFDDDR FVGHGARNEE GRAVLVPLPR
501: EAATSTHSRS LSCPPKIDAM AALGGAGTGA LDEQMVDVAM GRSATYNGYG DAMRPPLPPL IQMDREE
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.