Factsheet for GSMUA_Achr7P22250_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P22270_001	Banana	endoplasmic reticulum, plasma membrane	97.73	97.73
GSMUA_Achr11P...	Banana	cytosol, nucleus, plasma membrane	55.11	19.21
Zm00001d028809_P001	Maize	nucleus, peroxisome, plasma membrane	42.61	13.3
EER92399	Sorghum	cytosol, nucleus, plasma membrane	40.34	12.37
TraesCS4B01G188300.1	Wheat	plasma membrane	36.36	11.92
TraesCS4A01G115700.1	Wheat	nucleus, peroxisome, plasma membrane	38.07	11.82
Os03t0299800-01	Rice	mitochondrion	40.91	11.8
TraesCS4D01G189700.1	Wheat	nucleus, peroxisome, plasma membrane	37.5	11.72
GSMUA_AchrUn_...	Banana	cytosol	36.36	11.7
TraesCS1B01G115100.1	Wheat	nucleus, peroxisome, plasma membrane	37.5	11.64
HORVU4Hr1G054940.1	Barley	cytosol	37.5	11.54
GSMUA_Achr11P...	Banana	nucleus	57.39	10.78
GSMUA_Achr11P...	Banana	cytosol	32.39	10.34
GSMUA_Achr11P...	Banana	mitochondrion	21.59	6.88
GSMUA_Achr5P28010_001	Banana	cytosol, peroxisome, plasma membrane	19.89	6.69
GSMUA_Achr8P21270_001	Banana	cytosol	10.8	4.67

Protein Annotations

EnsemblPlants:GSMUA_Achr7P22250_001	EnsemblPlants:GSMUA_Achr7T22250_001	EnsemblPlantsGene:GSMUA_Achr7G22250_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:PLAC_motif_containing	PANTHER:PTHR31045	PANTHER:PTHR31045:SF6	PFAM:PF04749	SEG:seg	TIGRFAMs:TIGR01571
TMHMM:TMhelix	UniParc:UPI000294B5EF	UniProt:M0TJR1	MapMan:35.2	:	:

Description

Putative uncharacterized protein Sb03g038490 [Source:GMGC_GENE;Acc:GSMUA_Achr7G22250_001]

Coordinates

chr7:+:24764886..24765416

Molecular Weight (calculated)

19462.2 Da

IEP (calculated)

4.339

GRAVY (calculated)

0.132

Length

176 amino acids

Sequence
(BLAST)

001: MYVHVATFLL LCVAPFWIFN IAALNIHNYV IGDVIGIAGV VLCAFGLLYG GFWRIQMRRR FRLPRDAFCF GSASLTDYVK WMFCWACALA QEVRTGNFYD
101: VEDDSLFRKL MDGEEERQTI ATETRDGSEV LRGDATTPPV QPLMGSEDVV GGANVSTQFP PASISAGEED DAPSST

Best Arabidopsis Sequence Match ( AT5G05350.1 )
(BLAST)

001: MGSVDEVEIS KTRVSCPPAL STSHKILISE EKPRRWSESS LPDVSNRIKL LKFGSPSARL KRMAEERDEV SRSVNSSSSS SHDVVSSRKI EWACLMKMGK
101: QWLQNPLNMV MFLWIFVVAV SGAILFMVMT GMLNHALPKK SQRDVWFEVN NQILNALFTL MCLYQHPKRF YHLVLLCRWK QDDVTTLRKI FCKNGTYKPN
201: EWIHMMVVVL LLHLNCFAQY ALCGLNLGYR RSERPAIGVA ICISFAIAAP TAAGLYTILS PLGKDYDPQG DEENQVQAVG EGPVSNRKLS LERRYSFASN
301: DVSNPEWREG VLDIWEDISL AYLSLFCTFC LFGWNMERIG FGNMYVHIAT FVLFCLAPFF IFNLAAINID NEMVRDALGY TGIVLCLFGL LYGGFWRIQM
401: RKRFKLPGYN ICCGRPAIAD CTLWLFCCWC SLAQEVRTAN SYEIVEDKFC KRREENSKID DEVVVSALPR EDGVFDPSCL PKKMTTTMIA SSTLSPSRQK
501: DETCLGEKGD EALSPPSPPF IHREAS

Arabidopsis Description

PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q5XV52]
SUBAcon: [peroxisome,plastid,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.