Factsheet for GSMUA_Achr11P19730_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P22250_001	Banana	endoplasmic reticulum, plasma membrane	19.21	55.11
GSMUA_Achr7P22270_001	Banana	endoplasmic reticulum, plasma membrane	19.01	54.55
EES01683	Sorghum	cytosol, peroxisome, plasma membrane	46.93	46.2
Os01t0825900-01	Rice	cytosol	47.33	45.52
TraesCS3B01G379000.1	Wheat	cytosol, peroxisome, plasma membrane	44.55	43.77
TraesCS3D01G340900.1	Wheat	cytosol, peroxisome, plasma membrane	43.56	42.72
Zm00001d043026_P001	Maize	cytosol, peroxisome, plasma membrane	45.35	42.41
TraesCS3A01G347300.1	Wheat	plasma membrane	45.54	40.71
EES18024	Sorghum	cytosol, nucleus, plasma membrane	38.02	37.65
Zm00001d038030_P001	Maize	cytosol, nucleus, plasma membrane	38.81	37.48
HORVU6Hr1G024570.1	Barley	plasma membrane	36.44	37.4
TraesCS5D01G143200.1	Wheat	plasma membrane	39.21	36.4
Os11t0109700-02	Rice	plasma membrane	39.8	36.35
Os05t0341900-00	Rice	plasma membrane	37.23	36.08
GSMUA_Achr11P...	Banana	cytosol	39.21	35.93
HORVU5Hr1G047230.1	Barley	plasma membrane	38.22	35.48
TraesCS5B01G148400.1	Wheat	plasma membrane	37.62	35.06
GSMUA_Achr5P28010_001	Banana	cytosol, peroxisome, plasma membrane	36.24	34.99
Zm00001d023228_P001	Maize	plasma membrane	39.01	34.5
GSMUA_Achr8P21270_001	Banana	cytosol	27.72	34.4
TraesCS6B01G156100.1	Wheat	plasma membrane	34.06	34.19
TraesCS6D01G117700.1	Wheat	plasma membrane	33.86	34.0
TraesCS6A01G127700.1	Wheat	peroxisome, plasma membrane, vacuole	33.66	33.8
KXG22799	Sorghum	mitochondrion	40.79	33.07
GSMUA_AchrUn_...	Banana	cytosol	35.64	32.91
TraesCS5A01G149800.1	Wheat	plasma membrane, plastid	38.22	32.77
GSMUA_Achr11P...	Banana	nucleus	60.2	32.44
Os12t0109700-01	Rice	golgi, mitochondrion, plasma membrane	16.44	30.74
GSMUA_Achr11P...	Banana	mitochondrion	30.89	28.26

Protein Annotations

EnsemblPlants:GSMUA_Achr11P19730_001	EnsemblPlants:GSMUA_Achr11T19730_001	EnsemblPlantsGene:GSMUA_Achr11G19730_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF2985	InterPro:PLAC_motif_containing	PANTHER:PTHR31045	PANTHER:PTHR31045:SF6	PFAM:PF04749	PFAM:PF11204
SEG:seg	TIGRFAMs:TIGR01571	TMHMM:TMhelix	UniParc:UPI0002949862	UniProt:M0RTQ3	MapMan:35.2

Description

SAG20, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G19730_001]

Coordinates

chr11:-:20805875..20807464

Molecular Weight (calculated)

56964.6 Da

IEP (calculated)

6.949

GRAVY (calculated)

-0.080

Length

505 amino acids

Sequence
(BLAST)

001: MVSCSTSDGE QESSSDPNVP ELRDYRIQIP SLQKTLLEPR SGRSRLLDLL KKLNFSSPLR ILRRTLNQRE EISLSVPSPV GIQRRFHVQF FGRINWSSFF
101: GTCRAWLKNP MNIALLIWLI CVAVSATMLG LLLLGLLNNA FPTKSSRNHW IEINNQVLNA LFTLMSIYQH PRLFHHLVML CRWNSEDIVE LRKIYCKNGA
201: YRPHEWAHMM VALLLLHITC FAQYTLCGLY WGYARKNRPE FLEDFFFALG LAAPVLAALY TLYSPLGREY SSNSDEESQS QIPKACDEQR RKHGPRTAAS
301: KPEWAGGLLD RLGFGNMYVH IFTFLLLCVA PFWIFNISAL NIHNYVIGDV IGIAGVVLCA FGLLYGGFWR IQMRKRFKLP GDTCCLGSAS LTDYGKWLFC
401: WACSLAQEVR TGNLYDVEDD SLSRRVMQSG DGEGESAVDP RPCQDDSGTA MTTSETQHRE GENDGAAAED AALVLSDVMN PPIPPLIQLR EVVCDDDSIH
501: PPPST

Best Arabidopsis Sequence Match ( AT5G05350.1 )
(BLAST)

001: MGSVDEVEIS KTRVSCPPAL STSHKILISE EKPRRWSESS LPDVSNRIKL LKFGSPSARL KRMAEERDEV SRSVNSSSSS SHDVVSSRKI EWACLMKMGK
101: QWLQNPLNMV MFLWIFVVAV SGAILFMVMT GMLNHALPKK SQRDVWFEVN NQILNALFTL MCLYQHPKRF YHLVLLCRWK QDDVTTLRKI FCKNGTYKPN
201: EWIHMMVVVL LLHLNCFAQY ALCGLNLGYR RSERPAIGVA ICISFAIAAP TAAGLYTILS PLGKDYDPQG DEENQVQAVG EGPVSNRKLS LERRYSFASN
301: DVSNPEWREG VLDIWEDISL AYLSLFCTFC LFGWNMERIG FGNMYVHIAT FVLFCLAPFF IFNLAAINID NEMVRDALGY TGIVLCLFGL LYGGFWRIQM
401: RKRFKLPGYN ICCGRPAIAD CTLWLFCCWC SLAQEVRTAN SYEIVEDKFC KRREENSKID DEVVVSALPR EDGVFDPSCL PKKMTTTMIA SSTLSPSRQK
501: DETCLGEKGD EALSPPSPPF IHREAS

Arabidopsis Description

PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q5XV52]
SUBAcon: [peroxisome,plastid,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.