Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G340900.1 | Wheat | cytosol, peroxisome, plasma membrane | 90.66 | 90.49 |
| TraesCS3A01G347300.1 | Wheat | plasma membrane | 88.72 | 80.71 |
| EES01683 | Sorghum | cytosol, peroxisome, plasma membrane | 65.18 | 65.3 |
| Os01t0825900-01 | Rice | cytosol | 65.56 | 64.19 |
| Zm00001d043026_P001 | Maize | cytosol, peroxisome, plasma membrane | 59.73 | 56.85 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plasma membrane | 43.77 | 44.55 |
| TraesCS6B01G156100.1 | Wheat | plasma membrane | 38.33 | 39.16 |
| TraesCS5B01G148500.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.94 | 38.77 |
| TraesCS5B01G148400.1 | Wheat | plasma membrane | 39.88 | 37.82 |
| TraesCS4B01G188300.1 | Wheat | plasma membrane | 37.35 | 35.75 |
| TraesCS1B01G115100.1 | Wheat | nucleus, peroxisome, plasma membrane | 39.11 | 35.45 |
| GSMUA_Achr5P28010_001 | Banana | cytosol, peroxisome, plasma membrane | 32.3 | 31.74 |
| TraesCS1B01G308300.1 | Wheat | cytosol, peroxisome, plasma membrane | 30.93 | 28.29 |
| TraesCS3B01G602800.1 | Wheat | plasma membrane | 32.49 | 27.83 |
| GSMUA_Achr11P... | Banana | nucleus | 42.8 | 23.48 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G379000.1 | EnsemblPlantsGene:TraesCS3B01G379000 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF6 |
| PFAM:PF04749 | PFAM:PF11204 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr3B:+:597046036..597047580
Molecular Weight (calculated)
56915.0 Da
IEP (calculated)
6.108
GRAVY (calculated)
0.149
Length
514 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNTVAEEDI EDIPNSDANP PILTEYHITV PTLHDGLMQG EHQHERRLLD FLKATPSVQW LKDINVCAPL GKFQLPSIGV HRYLHVHFIR TVDWSSLLAI
101: CKNHLKHPLN IALLIWLLCV AAAGAMLGLL LLGLLKKAFP SRALRHHWIE IDNQILNALF TLMSIYQHPI LVHHLVLLCR WQPEDAAEVR KVYCKNGARR
201: PNERAHMSFV VALLHITCIS QYMECSLYWG YPSRSRSEFA ENFFFILGVA APVVAGAHMV YSPLGRDDDV AAASCEEAKQ LHSAGAEESP EETTAVGNPM
301: WAGELLDCGE DPAACYLSFL CTFCVFGWNM ERLGLGNMYM HTAMFLLLCV APLWVFNVTA LSIHDYALSD AFGAAGVVLC FLGLLYGGFW RIQMRKRLGL
401: PRSRWCCGSS SLTDYAQWLL CWPCALAQEV RTANLYGLRD DGGLYGKLVD GGDPERGPDV PVCVGMHEGI DAAVHLAVDG EMIPPVQPVV ESGRQRQAGA
501: EEIVANGSSV QLQS
101: CKNHLKHPLN IALLIWLLCV AAAGAMLGLL LLGLLKKAFP SRALRHHWIE IDNQILNALF TLMSIYQHPI LVHHLVLLCR WQPEDAAEVR KVYCKNGARR
201: PNERAHMSFV VALLHITCIS QYMECSLYWG YPSRSRSEFA ENFFFILGVA APVVAGAHMV YSPLGRDDDV AAASCEEAKQ LHSAGAEESP EETTAVGNPM
301: WAGELLDCGE DPAACYLSFL CTFCVFGWNM ERLGLGNMYM HTAMFLLLCV APLWVFNVTA LSIHDYALSD AFGAAGVVLC FLGLLYGGFW RIQMRKRLGL
401: PRSRWCCGSS SLTDYAQWLL CWPCALAQEV RTANLYGLRD DGGLYGKLVD GGDPERGPDV PVCVGMHEGI DAAVHLAVDG EMIPPVQPVV ESGRQRQAGA
501: EEIVANGSSV QLQS
001: MADLDKLEGG GGGGAVVIAD IRADEGGGAV EERERLTELE GISVLDFDLL CSTVALQTQG KWRKLESSEG EDATEDDYGG GVLRLWEGDV MDCFEDRHLC
101: IESACCPCYR FGKNMTRTGF GSCFLQGAVH MILIAGFLFN VVAFAVTKRH CFLYLAIAFV LLIGSYLGFF RMLIRRKFNI RGTDSFLDDF IHHLVCPFCT
201: LTQESKTLEM NNVHDGIWHG RGDTLCIGGY SEGKAFLELH SPPVIASTMS SSQP
101: IESACCPCYR FGKNMTRTGF GSCFLQGAVH MILIAGFLFN VVAFAVTKRH CFLYLAIAFV LLIGSYLGFF RMLIRRKFNI RGTDSFLDDF IHHLVCPFCT
201: LTQESKTLEM NNVHDGIWHG RGDTLCIGGY SEGKAFLELH SPPVIASTMS SSQP
Arabidopsis Description
At1g11380 [Source:UniProtKB/TrEMBL;Acc:Q8LFV5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.