Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G117700.1 | Wheat | plasma membrane | 90.46 | 90.46 |
| TraesCS6A01G127700.1 | Wheat | peroxisome, plasma membrane, vacuole | 88.67 | 88.67 |
| HORVU6Hr1G024570.1 | Barley | plasma membrane | 79.92 | 81.71 |
| Zm00001d038030_P001 | Maize | cytosol, nucleus, plasma membrane | 53.48 | 51.43 |
| EES18024 | Sorghum | cytosol, nucleus, plasma membrane | 52.09 | 51.37 |
| Os05t0341900-00 | Rice | plasma membrane | 50.5 | 48.75 |
| TraesCS3B01G379000.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.16 | 38.33 |
| TraesCS5B01G148500.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.38 | 37.38 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plasma membrane | 34.19 | 34.06 |
| TraesCS4B01G188300.1 | Wheat | plasma membrane | 35.59 | 33.33 |
| TraesCS5B01G148400.1 | Wheat | plasma membrane | 35.39 | 32.84 |
| TraesCS1B01G115100.1 | Wheat | nucleus, peroxisome, plasma membrane | 35.39 | 31.39 |
| TraesCS3B01G602800.1 | Wheat | plasma membrane | 31.21 | 26.17 |
| TraesCS1B01G308300.1 | Wheat | cytosol, peroxisome, plasma membrane | 28.43 | 25.44 |
| GSMUA_Achr5P28010_001 | Banana | cytosol, peroxisome, plasma membrane | 26.04 | 25.05 |
| GSMUA_Achr11P... | Banana | nucleus | 33.6 | 18.04 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G156100.1 | EnsemblPlantsGene:TraesCS6B01G156100 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF8 |
| PFAM:PF04749 | PFAM:PF11204 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr6B:+:159128352..159129863
Molecular Weight (calculated)
55229.9 Da
IEP (calculated)
8.260
GRAVY (calculated)
-0.037
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLGGHHTA AAHAKVELEA ELGERNGAPA INPLVEQEAR GPMPMADDRR TRPERVRRLI RRLRPAPIGS AFKRWLKHPA HLAQFAWAVC VALSFALLGL
101: LLLGVFDGAF RRRSVRDRWV EIVNQILNAL FTLMTIYQHP ELFHHAALLL RWRPGDEKEL RKAYCRKGSG GGEAQRERER LHLSVVVGLL HLTCFAQYAM
201: CGLFWGYSST ARPDAAMTPL AGVSAVAPVV AGLYMYYSPL GRKSEQSMHQ ETEEVCDDDS MVAAVITDPA GREWAGGLLD VRDDPAACWL SCLCTFCVFG
301: WNMERLGFGN MHVHGAMFAL LCFAPLWVLS HAATNIRSKA VSNAVSAAGV VLCALGLLYG GFWRARMRRK FGLAGKDRLP FFSSLSLDVA DYLQWMFCWG
401: CALAQEVRTG NLLLDVESTG GSGGVQVQVD NSLRPLPRED GSFEIAAVAG TPSVPLAYNS PRRGEELPLV QLKRDGSWSP GEMRPPVPPL MQDGGGPQGG
501: RIQ
101: LLLGVFDGAF RRRSVRDRWV EIVNQILNAL FTLMTIYQHP ELFHHAALLL RWRPGDEKEL RKAYCRKGSG GGEAQRERER LHLSVVVGLL HLTCFAQYAM
201: CGLFWGYSST ARPDAAMTPL AGVSAVAPVV AGLYMYYSPL GRKSEQSMHQ ETEEVCDDDS MVAAVITDPA GREWAGGLLD VRDDPAACWL SCLCTFCVFG
301: WNMERLGFGN MHVHGAMFAL LCFAPLWVLS HAATNIRSKA VSNAVSAAGV VLCALGLLYG GFWRARMRRK FGLAGKDRLP FFSSLSLDVA DYLQWMFCWG
401: CALAQEVRTG NLLLDVESTG GSGGVQVQVD NSLRPLPRED GSFEIAAVAG TPSVPLAYNS PRRGEELPLV QLKRDGSWSP GEMRPPVPPL MQDGGGPQGG
501: RIQ
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.