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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G427400.1
TraesCS1B01G462300.1
TraesCS1D01G437100.1
TraesCS3A01G143000.1
TraesCS3A01G221800.1
TraesCS3B01G162100.1
TraesCS3B01G251600.1
TraesCS3D01G144600.1
TraesCS3D01G231300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G10980.1 TraesCS1A01G427400.1 AT2G42580.1 19000166
AT3G10980.1 TraesCS1B01G462300.1 AT2G42580.1 19000166
AT3G10980.1 TraesCS1D01G437100.1 AT2G42580.1 19000166
AT3G10980.1 TraesCS3A01G143000.1 AT2G42580.1 19000166
AT3G10980.1 TraesCS3A01G221800.1 AT2G42580.1 19000166
AT3G10980.1 TraesCS3B01G162100.1 AT2G42580.1 19000166
AT3G10980.1 TraesCS3B01G251600.1 AT2G42580.1 19000166
AT3G10980.1 TraesCS3D01G144600.1 AT2G42580.1 19000166
AT3G10980.1 TraesCS3D01G231300.1 AT2G42580.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G542600.1 Wheat plasma membrane 77.0 81.05
TraesCS3A01G537100.1 Wheat cytosol, nucleus, plasma membrane 76.0 74.63
HORVU3Hr1G117910.1 Barley cytosol, nucleus, plasma membrane 66.5 65.2
OQU78568 Sorghum plasma membrane, plastid 48.0 61.8
Zm00001d052297_P001 Maize plasma membrane 44.5 60.0
CDX98836 Canola plasma membrane 41.17 58.39
CDX70157 Canola plasma membrane 41.17 56.91
Bra009106.1-P Field mustard plasma membrane 40.67 56.22
CDY00984 Canola plastid 43.5 50.0
CDY70258 Canola plastid 43.5 49.34
Bra029884.1-P Field mustard plastid 42.83 48.67
Solyc06g048810.2.1 Tomato plasma membrane 30.17 48.14
AT5G05350.1 Thale cress cytosol, peroxisome, plasma membrane, plastid 41.67 47.53
AT3G10980.1 Thale cress cytosol, peroxisome, plasma membrane 43.5 46.36
TraesCS1B01G308300.1 Wheat cytosol, peroxisome, plasma membrane 42.33 45.2
KRH73231 Soybean nucleus 41.83 44.98
KRH31210 Soybean cytosol 42.0 44.6
PGSC0003DMT400017002 Potato cytosol, nucleus, plasma membrane 40.83 43.99
Solyc06g048780.1.1 Tomato cytosol, nucleus, plasma membrane, plastid 19.17 42.91
Solyc06g048790.1.1 Tomato cytosol, peroxisome, plasma membrane 35.83 42.57
KRG97664 Soybean cytosol, nucleus, peroxisome 38.0 42.3
GSMUA_Achr8P21270_001 Banana cytosol 28.67 42.26
KRH76069 Soybean peroxisome, plasma membrane, plastid, vacuole 26.33 41.69
KRH65507 Soybean plasma membrane 38.33 41.22
VIT_13s0067g02190.t01 Wine grape cytosol, peroxisome, plasma membrane 42.67 36.01
TraesCS4B01G188300.1 Wheat plasma membrane 31.0 34.64
TraesCS5B01G148500.1 Wheat cytosol, peroxisome, plasma membrane 28.5 34.0
TraesCS1B01G115100.1 Wheat nucleus, peroxisome, plasma membrane 31.83 33.69
PGSC0003DMT400070946 Potato plasma membrane 8.17 32.89
TraesCS3B01G379000.1 Wheat cytosol, peroxisome, plasma membrane 27.83 32.49
TraesCS6B01G156100.1 Wheat plasma membrane 26.17 31.21
TraesCS5B01G148400.1 Wheat plasma membrane 26.67 29.52
Protein Annotations
EnsemblPlants:TraesCS3B01G602800.1EnsemblPlantsGene:TraesCS3B01G602800InterPro:DUF2985InterPro:PLAC_motif_containingPANTHER:PTHR31045PANTHER:PTHR31045:SF7
PFAM:PF04749PFAM:PF11204SEG:segTIGRFAMs:TIGR01571TMHMM:TMhelixMapMan:35.2
Description
No Description!
Coordinates
chr3B:-:822808188..822809990
Molecular Weight (calculated)
66885.7 Da
IEP (calculated)
7.968
GRAVY (calculated)
-0.324
Length
600 amino acids
Sequence
(BLAST)
001: MVAGGATHKR PPADDIMMHQ EEPANTDAKN DHHIAIYFID SPQQTDDRLI LSDKTNGQED YSFQHHLQTP SSPPCYSTDH MLRADQRHYN SNNGSPSSSQ
101: QQQQHERSSS QQQQQHERSS NPPRRRQSRR RRLAAAVPFV RKIKWGPLWD KSKEWIKNPM NMALFVWIVA VGISGAILFM VMTGMLNAVL RTKSQKDTWF
201: EVNNQILNAL FTLMCLYNHP RRFYHLALLC RWRAGDMAAL REVYCKGGTV KPNERRHMMV VVLLLHLNCL AQYALCGLNL GLSRNRRPPV GVGLTVTVAI
301: CAPAVASMYN NLSPLGKDYE VQAADDEEQE SSSSGSRQRL QHKTVERRYS FSPSPPQRQG LEMGAAGAVV VEVGEEEEGT VAVAAPEWSG GLVWDLWEDI
401: SLAYLSLFCS CCVFGWNAGR LGFGNAYVHA ATFILLCLAP FFIFTLAAIN IDDEAARLAL SLGGTLLCVL GLLYGGFWRI QMRRRFGLPG SGFCCGRPDV
501: TDCFQWLCCC PCALAQEVRT ADAYDIVHHR MVSRRQSQSR RGDDAGEEEA SSSRVQMQQP LRFAGVFASD HGGVTNTNSN SDTSNTSTTP PALPVGIQRQ
Best Arabidopsis Sequence Match ( AT3G10980.1 )
(BLAST)
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.