Factsheet for Zm00001d052297_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004494_P001
Zm00001d006366_P001
Zm00001d008930_P003
Zm00001d009724_P009
Zm00001d011352_P001
Zm00001d033961_P001
Zm00001d039362_P002
Zm00001d044479_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10980.1	Zm00001d004494_P001	AT2G42580.1	19000166
AT3G10980.1	Zm00001d006366_P001	AT2G42580.1	19000166
AT3G10980.1	Zm00001d008930_P003	AT2G42580.1	19000166
AT3G10980.1	Zm00001d009724_P009	AT2G42580.1	19000166
AT3G10980.1	Zm00001d011352_P001	AT2G42580.1	19000166
AT3G10980.1	Zm00001d033961_P001	AT2G42580.1	19000166
AT3G10980.1	Zm00001d039362_P002	AT2G42580.1	19000166
AT3G10980.1	Zm00001d044479_P001	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78568	Sorghum	plasma membrane, plastid	73.03	69.74
CDX98836	Canola	plasma membrane	53.93	56.74
CDX70157	Canola	plasma membrane	53.48	54.84
Bra009106.1-P	Field mustard	plasma membrane	52.81	54.15
TraesCS3D01G542600.1	Wheat	plasma membrane	60.45	47.19
Bra029884.1-P	Field mustard	plastid	54.83	46.21
Solyc06g048810.2.1	Tomato	plasma membrane	38.88	46.01
CDY00984	Canola	plastid	53.71	45.79
CDY70258	Canola	plastid	54.38	45.75
AT5G05350.1	Thale cress	cytosol, peroxisome, plasma membrane, plastid	52.81	44.68
TraesCS3B01G602800.1	Wheat	plasma membrane	60.0	44.5
HORVU3Hr1G117910.1	Barley	cytosol, nucleus, plasma membrane	60.67	44.12
TraesCS3A01G537100.1	Wheat	cytosol, nucleus, plasma membrane	59.78	43.54
Zm00001d010607_P001	Maize	cytosol, nucleus, plasma membrane, plastid	55.06	43.36
AT3G10980.1	Thale cress	cytosol, peroxisome, plasma membrane	54.83	43.34
PGSC0003DMT400017002	Potato	cytosol, nucleus, plasma membrane	50.79	40.57
KRH73231	Soybean	nucleus	50.34	40.14
KRH76069	Soybean	peroxisome, plasma membrane, plastid, vacuole	34.16	40.11
KRH31210	Soybean	cytosol	50.11	39.47
KRG97664	Soybean	cytosol, nucleus, peroxisome	47.42	39.15
KRH65507	Soybean	plasma membrane	48.99	39.07
Solyc06g048790.1.1	Tomato	cytosol, peroxisome, plasma membrane	44.04	38.81
Solyc06g048780.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	22.25	36.94
GSMUA_Achr8P21270_001	Banana	cytosol	33.48	36.61
VIT_13s0067g02190.t01	Wine grape	cytosol, peroxisome, plasma membrane	53.03	33.19
PGSC0003DMT400070946	Potato	plasma membrane	11.01	32.89
Zm00001d023227_P001	Maize	plasma membrane	36.63	32.67
Zm00001d038030_P001	Maize	cytosol, nucleus, plasma membrane	35.28	30.02
Zm00001d043026_P001	Maize	cytosol, peroxisome, plasma membrane	35.51	29.26
Zm00001d028809_P001	Maize	nucleus, peroxisome, plasma membrane	36.4	28.72
Zm00001d023228_P001	Maize	plasma membrane	36.63	28.55

Protein Annotations

EnsemblPlants:Zm00001d052297_P001	EnsemblPlants:Zm00001d052297_T001	EnsemblPlantsGene:Zm00001d052297	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF2985	InterPro:PLAC_motif_containing	PANTHER:PTHR31045	PANTHER:PTHR31045:SF7	PFAM:PF04749	PFAM:PF11204
ProteinID:AQK56708.1	SEG:seg	TIGRFAMs:TIGR01571	TMHMM:TMhelix	UniParc:UPI00022157F6	UniProt:K7U2J0
MapMan:35.2	:	:	:	:	:

Description

PLAC8 family protein

Coordinates

chr4:+:186404242..186405579

Molecular Weight (calculated)

49769.6 Da

IEP (calculated)

7.499

GRAVY (calculated)

0.026

Length

445 amino acids

Sequence
(BLAST)

001: MVVLGQQRTT PPTGGLLPEK SVQEQNSVSS SSSTRQMIGG GIQWWSRSLW VKSRAWIRNP MNMALSVWIL AVGVSGAILF MVMTGMLNRV LPSKPRRDTW
101: FEVNNQILNA LFTLMCLYQH PRRFYHLALV CRWKAGDMHQ LRQAYCKDGA CKPNERKHMT AVILLLHLNC FAQYALCGLN LGYRRPRRPV VGVALTVAVA
201: ICAPAVAGMY NNLSPLGRDY EAPAPAEGMI ISEEESQLQR KTPDTERRYS LVPRQGQGEE PQWVGGLWED LWDDMSLAYL SLFCSCCVFG WNASRLGLGN
301: MYVHVATFVL LCLAPFFILD LAAINVDDEA VRDALGLAGI FLCVFGLLYG GFWRIQMRRR FGLPENRACC GKPDLTDCLL WLCCYPCSLA QEVRTADAYE
401: VVVVLDTPMH RHPTLQEELA TMQEPPDEEE GGGVIPPSTV SATRS

Best Arabidopsis Sequence Match ( AT3G10980.1 )
(BLAST)

001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA

Arabidopsis Description

PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.