Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG22799 | Sorghum | mitochondrion | 59.89 | 54.9 |
| HORVU5Hr1G047230.1 | Barley | plasma membrane | 48.34 | 50.74 |
| TraesCS5D01G143200.1 | Wheat | plasma membrane | 47.64 | 50.0 |
| TraesCS5B01G148400.1 | Wheat | plasma membrane | 47.11 | 49.63 |
| Os11t0109700-02 | Rice | plasma membrane | 47.81 | 49.37 |
| TraesCS5A01G149800.1 | Wheat | plasma membrane, plastid | 47.64 | 46.18 |
| Zm00001d038030_P001 | Maize | cytosol, nucleus, plasma membrane | 37.48 | 40.92 |
| Zm00001d043026_P001 | Maize | cytosol, peroxisome, plasma membrane | 38.0 | 40.19 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plasma membrane | 34.5 | 39.01 |
| Zm00001d023227_P001 | Maize | plasma membrane | 32.4 | 37.07 |
| Zm00001d052297_P001 | Maize | plasma membrane | 28.55 | 36.63 |
| Zm00001d028809_P001 | Maize | nucleus, peroxisome, plasma membrane | 31.35 | 31.74 |
| GSMUA_Achr5P28010_001 | Banana | cytosol, peroxisome, plasma membrane | 26.09 | 28.49 |
| Zm00001d010607_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 25.92 | 26.19 |
| GSMUA_Achr11P... | Banana | nucleus | 36.08 | 21.99 |
Protein Annotations
| EMBL:BT040522 | EnsemblPlants:Zm00001d023228_P001 | EnsemblPlants:Zm00001d023228_T001 | EnsemblPlantsGene:Zm00001d023228 | EntrezGene:100273234 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | ncoils:Coil | PANTHER:PTHR31045 |
| PANTHER:PTHR31045:SF6 | PFAM:PF04749 | PFAM:PF11204 | ProteinID:AQK38644.1 | SEG:seg | TIGRFAMs:TIGR01571 |
| TMHMM:TMhelix | UniParc:UPI00017B7BC6 | UniProt:B4FTT4 | MapMan:35.2 | : | : |
Description
PLAC8 family protein
Coordinates
chr10:-:862028..863743
Molecular Weight (calculated)
62118.7 Da
IEP (calculated)
6.795
GRAVY (calculated)
0.114
Length
571 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVAGSDDAP SPATRGHGGT VRLLGYGPRT PTPQLTERLL DDKPQQRPHC CVEEELPSFW RWKPSDRGHV DWASVRRTCK EWIKNPMNVA LLLWLLCVGV
101: SGGMLVLLLL GLLDSAFQGT ADRNRWIEIN NQVLNALFTL MSLYQHPALC HHLFLLCRWR PADAAELRAA YCKEGAAAAP RHGDRAHVAV VVALLHLTVL
201: CQYVLCGLYW GYTRTTRPEL AEDGFFALGI LAPVAAAVYT VCSPLGKGDR CHDLASCSVP ASTKAQPTPT GHVVLEPDWA GGMLDCGGGD AAAGCLSLSC
301: TFCVFGWNME RLGLGNAYVH AVTFALLCFA PLWVLGVSAL HIHSHVVGDA VGGAGVLLCA CGLLYGGYWR IQMRRRFGLP GTTACCGSKS LTDYARWLFC
401: WPCALAQEVR TASMYHVDGE VFYSKTVDHD DLHADSGKRW LAVSKHRDVF SAADTVAVSQ QSAASGHRLV VIHDETTIMA PPVQVVVVQV EDKCSVVRHG
501: ETSGSSSSIS TSASEEEDVS FLESNREMLE DDADRSTSSD GSWRVEKVKR LINMVTLVSL LILLYTRGII L
101: SGGMLVLLLL GLLDSAFQGT ADRNRWIEIN NQVLNALFTL MSLYQHPALC HHLFLLCRWR PADAAELRAA YCKEGAAAAP RHGDRAHVAV VVALLHLTVL
201: CQYVLCGLYW GYTRTTRPEL AEDGFFALGI LAPVAAAVYT VCSPLGKGDR CHDLASCSVP ASTKAQPTPT GHVVLEPDWA GGMLDCGGGD AAAGCLSLSC
301: TFCVFGWNME RLGLGNAYVH AVTFALLCFA PLWVLGVSAL HIHSHVVGDA VGGAGVLLCA CGLLYGGYWR IQMRRRFGLP GTTACCGSKS LTDYARWLFC
401: WPCALAQEVR TASMYHVDGE VFYSKTVDHD DLHADSGKRW LAVSKHRDVF SAADTVAVSQ QSAASGHRLV VIHDETTIMA PPVQVVVVQV EDKCSVVRHG
501: ETSGSSSSIS TSASEEEDVS FLESNREMLE DDADRSTSSD GSWRVEKVKR LINMVTLVSL LILLYTRGII L
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.