Factsheet for GSMUA_Achr5P28010_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 2
vacuole 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	mitochondrion	49.14	46.56
GSMUA_Achr11P...	Banana	cytosol, nucleus, plasma membrane	34.99	36.24
GSMUA_Achr8P21270_001	Banana	cytosol	26.0	33.42
TraesCS3B01G379000.1	Wheat	cytosol, peroxisome, plasma membrane	31.74	32.3
TraesCS3D01G340900.1	Wheat	cytosol, peroxisome, plasma membrane	31.36	31.84
Os01t0825900-01	Rice	cytosol	31.74	31.62
EES01683	Sorghum	cytosol, peroxisome, plasma membrane	30.78	31.38
Zm00001d043026_P001	Maize	cytosol, peroxisome, plasma membrane	31.74	30.74
Os12t0109700-01	Rice	golgi, mitochondrion, plasma membrane	15.49	30.0
TraesCS3A01G347300.1	Wheat	plasma membrane	30.78	28.5
GSMUA_Achr11P...	Banana	cytosol	29.64	28.13
Os11t0109700-02	Rice	plasma membrane	29.45	27.85
Os05t0341900-00	Rice	plasma membrane	26.77	26.87
TraesCS5D01G143200.1	Wheat	plasma membrane	27.92	26.84
HORVU6Hr1G024570.1	Barley	plasma membrane	24.86	26.42
TraesCS5B01G148400.1	Wheat	plasma membrane	27.34	26.38
HORVU5Hr1G047230.1	Barley	plasma membrane	27.34	26.29
Zm00001d038030_P001	Maize	cytosol, nucleus, plasma membrane	26.2	26.2
Zm00001d023228_P001	Maize	plasma membrane	28.49	26.09
TraesCS6B01G156100.1	Wheat	plasma membrane	25.05	26.04
EES18024	Sorghum	cytosol, nucleus, plasma membrane	24.86	25.49
TraesCS6D01G117700.1	Wheat	plasma membrane	24.47	25.45
TraesCS6A01G127700.1	Wheat	peroxisome, plasma membrane, vacuole	24.28	25.25
GSMUA_AchrUn_...	Banana	cytosol	26.39	25.23
TraesCS5A01G149800.1	Wheat	plasma membrane, plastid	28.11	24.96
KXG22799	Sorghum	mitochondrion	28.87	24.24
GSMUA_Achr11P...	Banana	nucleus	35.95	20.06
GSMUA_Achr7P22270_001	Banana	endoplasmic reticulum, plasma membrane	6.69	19.89
GSMUA_Achr7P22250_001	Banana	endoplasmic reticulum, plasma membrane	6.69	19.89

Protein Annotations

EnsemblPlants:GSMUA_Achr5P28010_001	EnsemblPlants:GSMUA_Achr5T28010_001	EnsemblPlantsGene:GSMUA_Achr5G28010_001	Gene3D:3.10.450.50	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:DUF2985	InterPro:NTF2-like_dom_sf	InterPro:Wun1-like	PANTHER:PTHR31045	PFAM:PF07107
PFAM:PF11204	SEG:seg	SUPFAM:SSF54427	TMHMM:TMhelix	UniParc:UPI0002955922	UniProt:M0T2C5
MapMan:35.1	:	:	:	:	:

Description

Putative Wound-induced protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G28010_001]

Coordinates

chr5:+:28381324..28385335

Molecular Weight (calculated)

59203.6 Da

IEP (calculated)

6.228

GRAVY (calculated)

-0.163

Length

523 amino acids

Sequence
(BLAST)

001: MPSDRDESAV EMVPAVRLHQ DPDAPEHVDD AVSLIRSFQV LGPTRHRRHV LGLLRAPSLG GWIEKLQLFS PSRIFRHTVD VREEVSLSVS SPVDSQRRFG
101: ISFLGSINWS SVSASFKEWI EHPRNAALLI WLICVSVSTA MQGLLLLGLL DEAFPTKASR NHWIEINNQV LNALFTLMSL YQHPSLFHHL VLLCRWRPED
201: ITALRKIYCK DGAYRPHEWV HMLVVLLLLQ ITCFAQYISC GLYWGYASEA RPEFAEIFFF GLGFAAPVLA GAYAVYSPLG RECDAELDEE SQGGPNHEQS
301: SLCCGSKSLT DYLQWLFCWS CSLAQEVRTG NSYEVEDDSL YRKHSEDEEE DIHPFLHPLP RESGLNSLGK LQLERPEVVV RELYEAINAR DVAKLHRLLK
401: PDLEWRFHGQ PKHQHLKRLL TGEEETIAFK FEPQEVAAFG STVVAEGCGL GALWVHAWTV EPEGVITQVR EYFNTSLTVA RVGADSPASS SEDHDRSTHC
501: LPVWQSRLHR RARKSLPGLV LAI

Best Arabidopsis Sequence Match ( AT3G10985.1 )
(BLAST)

001: MRVLTGGVSP SSSSFEFVPL SVVSFGSTVI AEGCDAATSI SWIHAWTVAN GIITQVREYS NTSLTVTRIG NVVAGRRSAE IAPPSHCSSV WESQFSGRAG
101: KPVPGLVLAI

Arabidopsis Description

SAG20Senescence associated gene 20 [Source:UniProtKB/Swiss-Prot;Acc:Q94AK6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.