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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • endoplasmic reticulum 1
  • plasma membrane 2
  • mitochondrion 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d043026_P001 Maize cytosol, peroxisome, plasma membrane 80.7 76.67
TraesCS3D01G340900.1 Wheat cytosol, peroxisome, plasma membrane 65.5 65.24
TraesCS3B01G379000.1 Wheat cytosol, peroxisome, plasma membrane 65.3 65.18
Os01t0825900-01 Rice cytosol 64.72 63.24
TraesCS3A01G347300.1 Wheat plasma membrane 66.08 60.0
GSMUA_Achr11P... Banana cytosol, nucleus, plasma membrane 46.2 46.93
EES18024 Sorghum cytosol, nucleus, plasma membrane 38.4 38.63
KXG22798 Sorghum cytosol, peroxisome, plasma membrane 37.04 38.54
OQU78568 Sorghum plasma membrane, plastid 32.75 36.05
EER92399 Sorghum cytosol, nucleus, plasma membrane 40.16 35.89
KXG22799 Sorghum mitochondrion 40.94 33.71
EES19686 Sorghum cytosol, nucleus, peroxisome 34.11 30.92
GSMUA_Achr5P28010_001 Banana cytosol, peroxisome, plasma membrane 31.38 30.78
GSMUA_Achr11P... Banana nucleus 45.42 24.87
Protein Annotations
EnsemblPlants:EES01683EnsemblPlantsGene:SORBI_3003G340900GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:DUF2985
InterPro:PLAC_motif_containingPANTHER:PTHR31045PANTHER:PTHR31045:SF6PFAM:PF04749PFAM:PF11204ProteinID:EES01683
ProteinID:EES01683.1RefSeq:XP_002456563.1SEG:segTIGRFAMs:TIGR01571TMHMM:TMhelixUniParc:UPI0001A846FB
UniProt:C5XNW3MapMan:35.2::::
Description
hypothetical protein
Coordinates
chr3:+:66380837..66384135
Molecular Weight (calculated)
56895.9 Da
IEP (calculated)
6.140
GRAVY (calculated)
0.189
Length
513 amino acids
Sequence
(BLAST)
001: MARTNEDGIE DVPCSDPGSP ILAEYHITVP ALHDGPMQGT ARHERRLLDF LKATPSVQWL KKINLCSPLI KFRLPSASVH GSLHVQFIRT IDWSSVFTVC
101: KKWLKHPMHI ALLIWLLCVG AAGGMLVLLM LGLLNDAFPS KPLRNYWIEI DNQILNALFT LMSLYEHPNI IHHTVLLCRW LPEDAAKLRK VYCKNGMSRP
201: NERAHISFVV ALLHITCLCQ YADCGLYWGY PSRSRSDFAD NFFFILGIAA PVFAGVYTVY SPLGRGNDAL SDEGTNESDM VQVESPETGT VVSNPAWAGG
301: LFDCSEDPTA CYLSFLCTFC VFGWNMERLG FGNMYVHTVI FLLLCVAPFW VFNITAMQIH NYVLGDFIGS AGIVLCFFGL LYGGFWRIQM RKTFGLPRSR
401: WCFGSASLTD YTQWLFCWPC VLAQEVRTGN LYDAKNGSFY EKLMDGDDVE NGPGSVVTAE LPVSNGVAEG NGINVKLTVD GEMIPPTQPV IEFGGTGGID
501: SGFVANGSIQ LKS
Best Arabidopsis Sequence Match ( AT5G05350.1 )
(BLAST)
001: MGSVDEVEIS KTRVSCPPAL STSHKILISE EKPRRWSESS LPDVSNRIKL LKFGSPSARL KRMAEERDEV SRSVNSSSSS SHDVVSSRKI EWACLMKMGK
101: QWLQNPLNMV MFLWIFVVAV SGAILFMVMT GMLNHALPKK SQRDVWFEVN NQILNALFTL MCLYQHPKRF YHLVLLCRWK QDDVTTLRKI FCKNGTYKPN
201: EWIHMMVVVL LLHLNCFAQY ALCGLNLGYR RSERPAIGVA ICISFAIAAP TAAGLYTILS PLGKDYDPQG DEENQVQAVG EGPVSNRKLS LERRYSFASN
301: DVSNPEWREG VLDIWEDISL AYLSLFCTFC LFGWNMERIG FGNMYVHIAT FVLFCLAPFF IFNLAAINID NEMVRDALGY TGIVLCLFGL LYGGFWRIQM
401: RKRFKLPGYN ICCGRPAIAD CTLWLFCCWC SLAQEVRTAN SYEIVEDKFC KRREENSKID DEVVVSALPR EDGVFDPSCL PKKMTTTMIA SSTLSPSRQK
501: DETCLGEKGD EALSPPSPPF IHREAS
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q5XV52]
SUBAcon: [peroxisome,plastid,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.