CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 3
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01073
EES02247
OQU78515

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10980.1	EES01073	AT2G42580.1	19000166
AT3G10980.1	EES02247	AT2G42580.1	19000166
AT3G10980.1	OQU78515	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052297_P001	Maize	plasma membrane	69.74	73.03
CDX98836	Canola	plasma membrane	52.36	57.68
CDX70157	Canola	plasma membrane	52.36	56.22
Bra009106.1-P	Field mustard	plasma membrane	51.93	55.76
TraesCS3D01G542600.1	Wheat	plasma membrane	61.8	50.53
Bra029884.1-P	Field mustard	plastid	56.44	49.81
CDY00984	Canola	plastid	55.58	49.62
CDY70258	Canola	plastid	56.22	49.53
Solyc06g048810.2.1	Tomato	plasma membrane	39.48	48.94
TraesCS3B01G602800.1	Wheat	plasma membrane	61.8	48.0
AT5G05350.1	Thale cress	cytosol, peroxisome, plasma membrane, plastid	53.65	47.53
HORVU3Hr1G117910.1	Barley	cytosol, nucleus, plasma membrane	62.02	47.22
AT3G10980.1	Thale cress	cytosol, peroxisome, plasma membrane	56.65	46.89
EES19686	Sorghum	cytosol, nucleus, peroxisome	56.44	46.47
TraesCS3A01G537100.1	Wheat	cytosol, nucleus, plasma membrane	60.3	45.99
KRH73231	Soybean	nucleus	52.58	43.91
KRH31210	Soybean	cytosol	52.36	43.19
PGSC0003DMT400017002	Potato	cytosol, nucleus, plasma membrane	51.29	42.91
Solyc06g048780.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	24.25	42.16
KRG97664	Soybean	cytosol, nucleus, peroxisome	48.28	41.74
Solyc06g048790.1.1	Tomato	cytosol, peroxisome, plasma membrane	45.06	41.58
GSMUA_Achr8P21270_001	Banana	cytosol	36.27	41.52
KRH65507	Soybean	plasma membrane	48.93	40.86
KRH76069	Soybean	peroxisome, plasma membrane, plastid, vacuole	32.83	40.37
VIT_13s0067g02190.t01	Wine grape	cytosol, peroxisome, plasma membrane	54.08	35.44
PGSC0003DMT400070946	Potato	plasma membrane	11.16	34.9
KXG22798	Sorghum	cytosol, peroxisome, plasma membrane	35.62	33.67
EES01683	Sorghum	cytosol, peroxisome, plasma membrane	36.05	32.75
EES18024	Sorghum	cytosol, nucleus, plasma membrane	33.48	30.59
EER92399	Sorghum	cytosol, nucleus, plasma membrane	36.91	29.97
KXG22799	Sorghum	mitochondrion	36.7	27.45

Protein Annotations

EnsemblPlants:OQU78568	EnsemblPlantsGene:SORBI_3008G001800	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF2985
InterPro:PLAC_motif_containing	PANTHER:PTHR31045	PANTHER:PTHR31045:SF7	PFAM:PF04749	PFAM:PF11204	ProteinID:OQU78568
ProteinID:OQU78568.1	SEG:seg	TIGRFAMs:TIGR01571	TMHMM:TMhelix	UniParc:UPI000B8BA7A7	UniProt:A0A1Z5R442
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:161640..163525

Molecular Weight (calculated)

52266.3 Da

IEP (calculated)

8.080

GRAVY (calculated)

-0.090

Length

466 amino acids

Sequence
(BLAST)

001: MLGDGHRNNG SSFRSSSIAS SQTQRPSSSS SSSSRRFTVP FVKKIDWGSL WDKSKEWIRN PMNMALSVWI LAVGVSGAIL FMVMTGMLNR VLPSKPQRDT
101: WFEVNNQILN ALFTLMCLYQ HPRRFYHLAL LCRWRAGDMH QLRQVYCKDG TCKPNERKHM MVVILLLHLN CFAQYALCGL NLGYRRPQRP VIGVALTISV
201: AICAPAVAGL YNNLSPLGKD YEAAQPEADD EESQLQRKTP ETERRYTLVP RQGHGSGSSP SSPQWVGGLL GDMWEDMSLA YLSVFCSCCV FGWNMSRLGL
301: GNMYVHVATF VLLCLAPFFI FDLAAISVDD EAVRDALGLA GVFLCVFGLL YGGFWRIQMR RRFGLPENRA CCGKPDLTDC MQWLCCYSCS LAQEVRTADA
401: YEVVLEDKQQ PMPMPMHHPR HHPTLQEELS TMQEPLRFAG VFASPSPHLN DDGVTIPPSS LSATRT

Best Arabidopsis Sequence Match ( AT3G10980.1 )
(BLAST)

001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA

Arabidopsis Description

PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.