Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70157 | Canola | plasma membrane | 91.96 | 89.63 |
| AT5G05350.1 | Thale cress | cytosol, peroxisome, plasma membrane, plastid | 75.89 | 61.03 |
| CDY00984 | Canola | plastid | 68.79 | 55.75 |
| CDY70258 | Canola | plastid | 68.79 | 55.01 |
| Zm00001d052297_P001 | Maize | plasma membrane | 56.74 | 53.93 |
| Solyc06g048810.2.1 | Tomato | plasma membrane | 46.57 | 52.39 |
| OQU78568 | Sorghum | plasma membrane, plastid | 57.68 | 52.36 |
| PGSC0003DMT400017002 | Potato | cytosol, nucleus, plasma membrane | 62.41 | 47.4 |
| GSMUA_AchrUn_... | Banana | cytosol | 60.99 | 47.17 |
| KRH73231 | Soybean | nucleus | 61.7 | 46.77 |
| Solyc06g048790.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 54.85 | 45.94 |
| KRH31210 | Soybean | cytosol | 60.05 | 44.96 |
| Os05t0474900-01 | Rice | plasma membrane | 57.92 | 44.22 |
| HORVU1Hr1G070270.1 | Barley | cytosol, peroxisome, plasma membrane | 58.39 | 44.19 |
| TraesCS3D01G542600.1 | Wheat | plasma membrane | 59.34 | 44.04 |
| KRG97664 | Soybean | cytosol, nucleus, peroxisome | 55.79 | 43.78 |
| EES19686 | Sorghum | cytosol, nucleus, peroxisome | 58.39 | 43.64 |
| TraesCS1A01G298700.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 57.92 | 43.59 |
| TraesCS1D01G292600.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 57.92 | 43.59 |
| TraesCS1B01G308300.1 | Wheat | cytosol, peroxisome, plasma membrane | 57.68 | 43.42 |
| Zm00001d010607_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 57.68 | 43.19 |
| Solyc06g048780.1.1 | Tomato | cytosol, nucleus, plasma membrane, plastid | 27.19 | 42.91 |
| TraesCS3B01G602800.1 | Wheat | plasma membrane | 58.39 | 41.17 |
| GSMUA_Achr8P21270_001 | Banana | cytosol | 39.01 | 40.54 |
| HORVU3Hr1G117910.1 | Barley | cytosol, nucleus, plasma membrane | 58.39 | 40.36 |
| TraesCS3A01G537100.1 | Wheat | cytosol, nucleus, plasma membrane | 58.16 | 40.26 |
| PGSC0003DMT400070946 | Potato | plasma membrane | 13.71 | 38.93 |
| VIT_13s0067g02190.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 64.54 | 38.4 |
Protein Annotations
| EnsemblPlants:CDX98836 | EnsemblPlantsGene:GSBRNA2T00106936001 | GO:A0A078ECD4 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 |
| PANTHER:PTHR31045:SF15 | PFAM:PF04749 | PFAM:PF11204 | ProteinID:CDX98836 | ProteinID:CDX98836.1 | SEG:seg |
| TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI0004EE4582 | MapMan:35.2 | : | : |
Description
BnaC09g49990D
Coordinates
chrLK031907:+:224530..225801
Molecular Weight (calculated)
48454.1 Da
IEP (calculated)
7.296
GRAVY (calculated)
0.015
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTEERDEEA SRSGNSSSSN NFRERIREFK WASLVKMSKQ WLRNPLNMAL FLWILVVAVS GAILFMVMTG MLNAVLPKKS QRDVWFEVNN QILNALFTLM
101: CLYQHPKRFH HLVLLCRWKQ EDDVTALRKI YCEKGTHKPN ERFHMMVVVL LLHLNCFAQY ALCGLNLGFR RSERPPVGVG ICVSVAIAAP AVAGLYTILS
201: PLGKEYGDEE NQMDRKVSLE RRYSFASRGD DESDLEWRGG VLDIWEDIKV SYLSLLCTFC VFGWNMERIG FGNMYVHIAT FVLFCLAPFF IFNLAAINID
301: NEVVREGLGY MGIVLCVFGL LYGGFWRIQM RKRFKLPGYS FCCGRPAVAD CTLWLFCCWC SLAQEVRTAN AYEIVEDKLC KRREEEVKAD EDGVIDPSCL
401: PEKMKGDEAL SPPSPPFIHR EAT
101: CLYQHPKRFH HLVLLCRWKQ EDDVTALRKI YCEKGTHKPN ERFHMMVVVL LLHLNCFAQY ALCGLNLGFR RSERPPVGVG ICVSVAIAAP AVAGLYTILS
201: PLGKEYGDEE NQMDRKVSLE RRYSFASRGD DESDLEWRGG VLDIWEDIKV SYLSLLCTFC VFGWNMERIG FGNMYVHIAT FVLFCLAPFF IFNLAAINID
301: NEVVREGLGY MGIVLCVFGL LYGGFWRIQM RKRFKLPGYS FCCGRPAVAD CTLWLFCCWC SLAQEVRTAN AYEIVEDKLC KRREEEVKAD EDGVIDPSCL
401: PEKMKGDEAL SPPSPPFIHR EAT
001: MGSVDEVEIS KTRVSCPPAL STSHKILISE EKPRRWSESS LPDVSNRIKL LKFGSPSARL KRMAEERDEV SRSVNSSSSS SHDVVSSRKI EWACLMKMGK
101: QWLQNPLNMV MFLWIFVVAV SGAILFMVMT GMLNHALPKK SQRDVWFEVN NQILNALFTL MCLYQHPKRF YHLVLLCRWK QDDVTTLRKI FCKNGTYKPN
201: EWIHMMVVVL LLHLNCFAQY ALCGLNLGYR RSERPAIGVA ICISFAIAAP TAAGLYTILS PLGKDYDPQG DEENQVQAVG EGPVSNRKLS LERRYSFASN
301: DVSNPEWREG VLDIWEDISL AYLSLFCTFC LFGWNMERIG FGNMYVHIAT FVLFCLAPFF IFNLAAINID NEMVRDALGY TGIVLCLFGL LYGGFWRIQM
401: RKRFKLPGYN ICCGRPAIAD CTLWLFCCWC SLAQEVRTAN SYEIVEDKFC KRREENSKID DEVVVSALPR EDGVFDPSCL PKKMTTTMIA SSTLSPSRQK
501: DETCLGEKGD EALSPPSPPF IHREAS
101: QWLQNPLNMV MFLWIFVVAV SGAILFMVMT GMLNHALPKK SQRDVWFEVN NQILNALFTL MCLYQHPKRF YHLVLLCRWK QDDVTTLRKI FCKNGTYKPN
201: EWIHMMVVVL LLHLNCFAQY ALCGLNLGYR RSERPAIGVA ICISFAIAAP TAAGLYTILS PLGKDYDPQG DEENQVQAVG EGPVSNRKLS LERRYSFASN
301: DVSNPEWREG VLDIWEDISL AYLSLFCTFC LFGWNMERIG FGNMYVHIAT FVLFCLAPFF IFNLAAINID NEMVRDALGY TGIVLCLFGL LYGGFWRIQM
401: RKRFKLPGYN ICCGRPAIAD CTLWLFCCWC SLAQEVRTAN SYEIVEDKFC KRREENSKID DEVVVSALPR EDGVFDPSCL PKKMTTTMIA SSTLSPSRQK
501: DETCLGEKGD EALSPPSPPF IHREAS
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q5XV52]
SUBAcon: [peroxisome,plastid,cytosol,plasma membrane]
SUBAcon: [peroxisome,plastid,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.