Factsheet for GSMUA_Achr8P21270_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P25160_001
GSMUA_Achr4P08560_001
GSMUA_Achr7P24480_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10980.1	GSMUA_Achr10P...	AT2G42580.1	19000166
AT3G10980.1	GSMUA_Achr3P25160_001	AT2G42580.1	19000166
AT3G10980.1	GSMUA_Achr4P08560_001	AT2G42580.1	19000166
AT3G10980.1	GSMUA_Achr7P24480_001	AT2G42580.1	19000166
AT3G10980.1	GSMUA_AchrUn_...	AT2G42580.1	19000166
AT3G10980.1	GSMUA_AchrUn_...	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g048780.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	31.2	47.39
CDX98836	Canola	plasma membrane	40.54	39.01
KRH73231	Soybean	nucleus	52.58	38.35
Bra009106.1-P	Field mustard	plasma membrane	40.29	37.79
CDX70157	Canola	plasma membrane	40.29	37.79
KRH31210	Soybean	cytosol	50.61	36.46
OQU78568	Sorghum	plasma membrane, plastid	41.52	36.27
PGSC0003DMT400017002	Potato	cytosol, nucleus, plasma membrane	49.39	36.09
GSMUA_AchrUn_...	Banana	cytosol	48.16	35.83
AT5G05350.1	Thale cress	cytosol, peroxisome, plasma membrane, plastid	45.7	35.36
AT3G10980.1	Thale cress	cytosol, peroxisome, plasma membrane	48.16	34.81
Bra029884.1-P	Field mustard	plastid	44.72	34.47
Solyc06g048790.1.1	Tomato	cytosol, peroxisome, plasma membrane	42.26	34.06
CDY70258	Canola	plastid	44.23	34.03
CDY00984	Canola	plastid	43.49	33.91
KRH65507	Soybean	plasma membrane	46.44	33.87
KRG97664	Soybean	cytosol, nucleus, peroxisome	44.47	33.58
Solyc06g048810.2.1	Tomato	plasma membrane	30.96	33.51
Zm00001d052297_P001	Maize	plasma membrane	36.61	33.48
TraesCS3D01G542600.1	Wheat	plasma membrane	43.0	30.7
KRH76069	Soybean	peroxisome, plasma membrane, plastid, vacuole	28.5	30.61
VIT_13s0067g02190.t01	Wine grape	cytosol, peroxisome, plasma membrane	51.11	29.25
TraesCS3B01G602800.1	Wheat	plasma membrane	42.26	28.67
HORVU3Hr1G117910.1	Barley	cytosol, nucleus, plasma membrane	42.26	28.1
TraesCS3A01G537100.1	Wheat	cytosol, nucleus, plasma membrane	41.77	27.82
GSMUA_Achr11P...	Banana	cytosol, nucleus, plasma membrane	34.4	27.72
GSMUA_Achr5P28010_001	Banana	cytosol, peroxisome, plasma membrane	33.42	26.0
GSMUA_Achr11P...	Banana	mitochondrion	34.4	25.36
GSMUA_Achr11P...	Banana	cytosol	34.15	25.23
GSMUA_Achr11P...	Banana	nucleus	31.7	13.77
PGSC0003DMT400070946	Potato	plasma membrane	4.18	11.41
GSMUA_Achr7P22270_001	Banana	endoplasmic reticulum, plasma membrane	4.67	10.8
GSMUA_Achr7P22250_001	Banana	endoplasmic reticulum, plasma membrane	4.67	10.8

Protein Annotations

EnsemblPlants:GSMUA_Achr8P21270_001	EnsemblPlants:GSMUA_Achr8T21270_001	EnsemblPlantsGene:GSMUA_Achr8G21270_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF2985	PANTHER:PTHR31045	PANTHER:PTHR31045:SF15	PFAM:PF11204	SEG:seg	TMHMM:TMhelix
UniParc:UPI000294E18E	UniProt:M0TSD0	MapMan:35.2	:	:	:

Description

SAG20, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G21270_001]

Coordinates

chr8:-:26221340..26223082

Molecular Weight (calculated)

46256.7 Da

IEP (calculated)

8.063

GRAVY (calculated)

-0.261

Length

407 amino acids

Sequence
(BLAST)

001: MISMSNGKGT REIEEETESP TDQIMLEIST SRRTLLDKKR QNKFLAMLKT FPGRSSFAKV ESSTRLSSSS SKHGHEAEES IDVDIPHSFP SHGDQSSSTS
101: FRLPFVKKIN WASLVELFKT WIKEPTNMAL LLWMTCVVIS GSILFLVMTG MLNGALPRKS QRDTWFEVNN QILNALFTLM CLYQHPKRFH HLVLLCRWRQ
201: EDIVRLRNIY CKNGTRKPNE WMHMLVVVVL LHVNCFAQYA LCGLNWGYPR SERPAIGVGI CISVAIGAPA IASLYNIVSP LGKEYTEIDE ESQGSISSSV
301: DQRRAQKRYS FVDREDPRTA ETSPRWWLCC CSCSLAQEVR TADYYVVEED KFYVKELSNA IQPSLSPLPR EAGTAMFKSN PAFASEMHAH MVEEDAMRPP
401: LLSGIQR

Best Arabidopsis Sequence Match ( AT3G10980.1 )
(BLAST)

001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA

Arabidopsis Description

PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.