Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009106.1-P | Field mustard | plasma membrane | 98.62 | 98.62 |
| CDX98836 | Canola | plasma membrane | 89.63 | 91.96 |
| AT5G05350.1 | Thale cress | cytosol, peroxisome, plasma membrane, plastid | 74.19 | 61.22 |
| CDY00984 | Canola | plastid | 67.74 | 56.32 |
| CDY70258 | Canola | plastid | 67.74 | 55.58 |
| Zm00001d052297_P001 | Maize | plasma membrane | 54.84 | 53.48 |
| OQU78568 | Sorghum | plasma membrane, plastid | 56.22 | 52.36 |
| Solyc06g048810.2.1 | Tomato | plasma membrane | 45.16 | 52.13 |
| KRH73231 | Soybean | nucleus | 61.29 | 47.67 |
| GSMUA_AchrUn_... | Banana | cytosol | 59.68 | 47.35 |
| PGSC0003DMT400017002 | Potato | cytosol, nucleus, plasma membrane | 60.14 | 46.86 |
| KRH31210 | Soybean | cytosol | 59.45 | 45.66 |
| Solyc06g048790.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 53.0 | 45.54 |
| KRG97664 | Soybean | cytosol, nucleus, peroxisome | 55.76 | 44.9 |
| HORVU1Hr1G070270.1 | Barley | cytosol, peroxisome, plasma membrane | 57.37 | 44.54 |
| Os05t0474900-01 | Rice | plasma membrane | 56.45 | 44.22 |
| TraesCS3D01G542600.1 | Wheat | plasma membrane | 58.06 | 44.21 |
| TraesCS1D01G292600.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 56.68 | 43.77 |
| TraesCS1A01G298700.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 56.68 | 43.77 |
| TraesCS1B01G308300.1 | Wheat | cytosol, peroxisome, plasma membrane | 56.68 | 43.77 |
| Zm00001d010607_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 56.45 | 43.36 |
| EES19686 | Sorghum | cytosol, nucleus, peroxisome | 56.45 | 43.29 |
| Solyc06g048780.1.1 | Tomato | cytosol, nucleus, plasma membrane, plastid | 25.58 | 41.42 |
| TraesCS3B01G602800.1 | Wheat | plasma membrane | 56.91 | 41.17 |
| HORVU3Hr1G117910.1 | Barley | cytosol, nucleus, plasma membrane | 56.91 | 40.36 |
| GSMUA_Achr8P21270_001 | Banana | cytosol | 37.79 | 40.29 |
| TraesCS3A01G537100.1 | Wheat | cytosol, nucleus, plasma membrane | 56.68 | 40.26 |
| VIT_13s0067g02190.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 62.67 | 38.26 |
| PGSC0003DMT400070946 | Potato | plasma membrane | 13.13 | 38.26 |
Protein Annotations
| EnsemblPlants:CDX70157 | EnsemblPlantsGene:GSBRNA2T00136270001 | GO:A0A078C098 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 |
| PANTHER:PTHR31045:SF15 | PFAM:PF04749 | PFAM:PF11204 | ProteinID:CDX70157 | ProteinID:CDX70157.1 | SEG:seg |
| TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI0004EE9DE0 | MapMan:35.2 | : | : |
Description
BnaA10g25060D
Coordinates
chrLK031790:-:3347090..3348900
Molecular Weight (calculated)
49394.1 Da
IEP (calculated)
6.810
GRAVY (calculated)
0.055
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MTEERDEDAS HSSSNNFRER IRDIKWASLV KMSKQWLRNP LNMALFLWIL VVAVSGAILF MVMTGMLNAV LPKKSQRDVW FEVNNQILNA LFTLMCLYQH
101: PKRFYHLVLL CRWKQEEDDA KALEKVYCEK GARKPNERFH MMVVVLLLHL NCFAQYALCG LNLGFRRSER PPVGVGICVS FAIAAPAAAG LYTILSPLGK
201: EYGDEENPVD SKVSLERRYS FASRDDESDL EWRGGVLDIW EDIKVSYLSL LCTFCVFGWN MERIGFGNMY VHIATFVLFC LAPFFIFNLA AINIDNEVVR
301: EGLGYMGIVL CVFGLLYGGF WRIQMRKRFK LPGYSFCCGR PAVADCTLWL FCCWCSLAQE VRTANAYEIV EDKLCKRRGE EVIKVDEDGV VDPSCLPEKM
401: NTTMASSSSI SLSRPSGDEA LSPPSPPFIH REAT
101: PKRFYHLVLL CRWKQEEDDA KALEKVYCEK GARKPNERFH MMVVVLLLHL NCFAQYALCG LNLGFRRSER PPVGVGICVS FAIAAPAAAG LYTILSPLGK
201: EYGDEENPVD SKVSLERRYS FASRDDESDL EWRGGVLDIW EDIKVSYLSL LCTFCVFGWN MERIGFGNMY VHIATFVLFC LAPFFIFNLA AINIDNEVVR
301: EGLGYMGIVL CVFGLLYGGF WRIQMRKRFK LPGYSFCCGR PAVADCTLWL FCCWCSLAQE VRTANAYEIV EDKLCKRRGE EVIKVDEDGV VDPSCLPEKM
401: NTTMASSSSI SLSRPSGDEA LSPPSPPFIH REAT
001: MGSVDEVEIS KTRVSCPPAL STSHKILISE EKPRRWSESS LPDVSNRIKL LKFGSPSARL KRMAEERDEV SRSVNSSSSS SHDVVSSRKI EWACLMKMGK
101: QWLQNPLNMV MFLWIFVVAV SGAILFMVMT GMLNHALPKK SQRDVWFEVN NQILNALFTL MCLYQHPKRF YHLVLLCRWK QDDVTTLRKI FCKNGTYKPN
201: EWIHMMVVVL LLHLNCFAQY ALCGLNLGYR RSERPAIGVA ICISFAIAAP TAAGLYTILS PLGKDYDPQG DEENQVQAVG EGPVSNRKLS LERRYSFASN
301: DVSNPEWREG VLDIWEDISL AYLSLFCTFC LFGWNMERIG FGNMYVHIAT FVLFCLAPFF IFNLAAINID NEMVRDALGY TGIVLCLFGL LYGGFWRIQM
401: RKRFKLPGYN ICCGRPAIAD CTLWLFCCWC SLAQEVRTAN SYEIVEDKFC KRREENSKID DEVVVSALPR EDGVFDPSCL PKKMTTTMIA SSTLSPSRQK
501: DETCLGEKGD EALSPPSPPF IHREAS
101: QWLQNPLNMV MFLWIFVVAV SGAILFMVMT GMLNHALPKK SQRDVWFEVN NQILNALFTL MCLYQHPKRF YHLVLLCRWK QDDVTTLRKI FCKNGTYKPN
201: EWIHMMVVVL LLHLNCFAQY ALCGLNLGYR RSERPAIGVA ICISFAIAAP TAAGLYTILS PLGKDYDPQG DEENQVQAVG EGPVSNRKLS LERRYSFASN
301: DVSNPEWREG VLDIWEDISL AYLSLFCTFC LFGWNMERIG FGNMYVHIAT FVLFCLAPFF IFNLAAINID NEMVRDALGY TGIVLCLFGL LYGGFWRIQM
401: RKRFKLPGYN ICCGRPAIAD CTLWLFCCWC SLAQEVRTAN SYEIVEDKFC KRREENSKID DEVVVSALPR EDGVFDPSCL PKKMTTTMIA SSTLSPSRQK
501: DETCLGEKGD EALSPPSPPF IHREAS
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q5XV52]
SUBAcon: [peroxisome,plastid,cytosol,plasma membrane]
SUBAcon: [peroxisome,plastid,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.