Factsheet for Bra009106.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70157	Canola	plasma membrane	98.62	98.62
AT5G05350.1	Thale cress	cytosol, peroxisome, plasma membrane, plastid	73.5	60.65
Bra029884.1-P	Field mustard	plastid	67.28	55.3
Zm00001d052297_P001	Maize	plasma membrane	54.15	52.81
OQU78568	Sorghum	plasma membrane, plastid	55.76	51.93
Solyc06g048810.2.1	Tomato	plasma membrane	44.47	51.33
KRH73231	Soybean	nucleus	60.37	46.95
GSMUA_AchrUn_...	Banana	cytosol	58.99	46.8
PGSC0003DMT400017002	Potato	cytosol, nucleus, plasma membrane	59.45	46.32
Solyc06g048790.1.1	Tomato	cytosol, peroxisome, plasma membrane	52.53	45.15
KRH31210	Soybean	cytosol	58.53	44.96
HORVU1Hr1G070270.1	Barley	cytosol, peroxisome, plasma membrane	56.91	44.19
KRG97664	Soybean	cytosol, nucleus, peroxisome	54.84	44.16
Os05t0474900-01	Rice	plasma membrane	55.99	43.86
TraesCS3D01G542600.1	Wheat	plasma membrane	57.37	43.68
TraesCS1D01G292600.1	Wheat	cytosol, nucleus, plasma membrane, plastid	56.22	43.42
TraesCS1A01G298700.1	Wheat	cytosol, nucleus, plasma membrane, plastid	56.22	43.42
TraesCS1B01G308300.1	Wheat	cytosol, peroxisome, plasma membrane	56.22	43.42
Zm00001d010607_P001	Maize	cytosol, nucleus, plasma membrane, plastid	56.22	43.19
EES19686	Sorghum	cytosol, nucleus, peroxisome	56.22	43.11
Solyc06g048780.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	25.58	41.42
TraesCS3B01G602800.1	Wheat	plasma membrane	56.22	40.67
GSMUA_Achr8P21270_001	Banana	cytosol	37.79	40.29
HORVU3Hr1G117910.1	Barley	cytosol, nucleus, plasma membrane	56.22	39.87
TraesCS3A01G537100.1	Wheat	cytosol, nucleus, plasma membrane	55.99	39.77
PGSC0003DMT400070946	Potato	plasma membrane	13.13	38.26
VIT_13s0067g02190.t01	Wine grape	cytosol, peroxisome, plasma membrane	61.75	37.69

Protein Annotations

EnsemblPlants:Bra009106.1	EnsemblPlants:Bra009106.1-P	EnsemblPlantsGene:Bra009106	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF2985	InterPro:PLAC_motif_containing	PANTHER:PTHR31045	PANTHER:PTHR31045:SF15	PFAM:PF04749	PFAM:PF11204
SEG:seg	TIGRFAMs:TIGR01571	TMHMM:TMhelix	UniParc:UPI0002544A82	UniProt:M4CY09	MapMan:35.2

Description

AT3G10980 (E=7e-165) | unknown protein

Coordinates

chrA10:+:15271978..15273282

Molecular Weight (calculated)

49382.2 Da

IEP (calculated)

7.081

GRAVY (calculated)

0.064

Length

434 amino acids

Sequence
(BLAST)

001: MTEERDEDAS HSSSNNFRER IRDIKWASLV KMSKQWLRNP LNMALFLWIL VVAVSGAILF MVMTGMLNTV LPKKSQRDVW FEVNNQILNA LFTLMCLYQH
101: PKRFHHLVLL CRWKQEEDDA KALEKVYCEK GARKPNERFH MMVVVLLLHL NCFAQYALCG LNLGFRRSER PPVGVGICVS FAIAAPAAAG LYTILSPLGK
201: EYGDVENPVD SKVSLERRYS FASRDDESDL EWRGGVLDIW EDIKVSYLSL LCTFCVFGWN MERIGFGNMY VHIATFVLFC LAPFFIFNLA AINIDNEVVR
301: EGLGYMGIVL CVFGLLYGGF WRIQMRKRFK LPGYSFCCGR PAVADCTIWL FCCWCSLAQE VRTANAYEIV EDKLCKRREE EVIKVGEDGV VDPSCLPEKM
401: NTTMASSSSI SLSRPSGDEA LSPPSPPFIH REAT

Best Arabidopsis Sequence Match ( AT5G05350.1 )
(BLAST)

001: MGSVDEVEIS KTRVSCPPAL STSHKILISE EKPRRWSESS LPDVSNRIKL LKFGSPSARL KRMAEERDEV SRSVNSSSSS SHDVVSSRKI EWACLMKMGK
101: QWLQNPLNMV MFLWIFVVAV SGAILFMVMT GMLNHALPKK SQRDVWFEVN NQILNALFTL MCLYQHPKRF YHLVLLCRWK QDDVTTLRKI FCKNGTYKPN
201: EWIHMMVVVL LLHLNCFAQY ALCGLNLGYR RSERPAIGVA ICISFAIAAP TAAGLYTILS PLGKDYDPQG DEENQVQAVG EGPVSNRKLS LERRYSFASN
301: DVSNPEWREG VLDIWEDISL AYLSLFCTFC LFGWNMERIG FGNMYVHIAT FVLFCLAPFF IFNLAAINID NEMVRDALGY TGIVLCLFGL LYGGFWRIQM
401: RKRFKLPGYN ICCGRPAIAD CTLWLFCCWC SLAQEVRTAN SYEIVEDKFC KRREENSKID DEVVVSALPR EDGVFDPSCL PKKMTTTMIA SSTLSPSRQK
501: DETCLGEKGD EALSPPSPPF IHREAS

Arabidopsis Description

PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q5XV52]
SUBAcon: [peroxisome,plastid,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.