Factsheet for HORVU1Hr1G070270.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G093390.2
HORVU3Hr1G027650.2
HORVU3Hr1G054240.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10980.1	HORVU1Hr1G093390.2	AT2G42580.1	19000166
AT3G10980.1	HORVU3Hr1G027650.2	AT2G42580.1	19000166
AT3G10980.1	HORVU3Hr1G054240.2	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G308300.1	Wheat	cytosol, peroxisome, plasma membrane	93.02	92.53
TraesCS1A01G298700.1	Wheat	cytosol, nucleus, plasma membrane, plastid	89.45	88.97
TraesCS1D01G292600.1	Wheat	cytosol, nucleus, plasma membrane, plastid	89.45	88.97
Os05t0474900-01	Rice	plasma membrane	75.31	75.99
EES19686	Sorghum	cytosol, nucleus, peroxisome	71.02	70.14
Zm00001d010607_P001	Maize	cytosol, nucleus, plasma membrane, plastid	68.69	67.96
CDX98836	Canola	plasma membrane	44.19	58.39
CDX70157	Canola	plasma membrane	44.54	57.37
Solyc06g048810.2.1	Tomato	plasma membrane	38.28	56.91
Bra009106.1-P	Field mustard	plasma membrane	44.19	56.91
GSMUA_AchrUn_...	Banana	cytosol	55.46	56.67
CDY70258	Canola	plastid	50.98	53.88
PGSC0003DMT400017002	Potato	cytosol, nucleus, plasma membrane	53.49	53.68
CDY00984	Canola	plastid	49.55	53.07
Bra029884.1-P	Field mustard	plastid	49.91	52.84
AT3G10980.1	Thale cress	cytosol, peroxisome, plasma membrane	52.59	52.22
AT5G05350.1	Thale cress	cytosol, peroxisome, plasma membrane, plastid	49.02	52.09
KRH73231	Soybean	nucleus	50.27	50.36
KRH31210	Soybean	cytosol	50.09	49.56
Solyc06g048790.1.1	Tomato	cytosol, peroxisome, plasma membrane	43.11	47.72
KRG97664	Soybean	cytosol, nucleus, peroxisome	45.8	47.5
Solyc06g048780.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	22.72	47.39
PGSC0003DMT400070946	Potato	plasma membrane	11.81	44.3
KRH65507	Soybean	plasma membrane	44.19	44.27
KRH76069	Soybean	peroxisome, plasma membrane, plastid, vacuole	29.7	43.8
VIT_13s0067g02190.t01	Wine grape	cytosol, peroxisome, plasma membrane	54.02	42.48
HORVU3Hr1G117910.1	Barley	cytosol, nucleus, plasma membrane	45.08	41.18
HORVU4Hr1G054940.1	Barley	cytosol	31.31	30.59
HORVU6Hr1G024570.1	Barley	plasma membrane	26.12	29.67
HORVU5Hr1G047240.2	Barley	endoplasmic reticulum	24.15	27.95
HORVU5Hr1G047230.1	Barley	plasma membrane	27.19	27.94

Protein Annotations

EnsemblPlants:HORVU1Hr1G070270.1	EnsemblPlantsGene:HORVU1Hr1G070270	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF2985
InterPro:PLAC_motif_containing	PANTHER:PTHR31045	PFAM:PF04749	PFAM:PF11204	TIGRFAMs:TIGR01571	TMHMM:TMhelix
UniParc:UPI0002951FCF	UniProt:M0XNQ7	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:488813450..488818290

Molecular Weight (calculated)

62962.3 Da

IEP (calculated)

8.235

GRAVY (calculated)

-0.205

Length

559 amino acids

Sequence
(BLAST)

001: MVPNGNGNLK AEIQRAESKT SENDPGAAGV NDLSTQGVSK QGNQQSGFLN FMNRFTSGAH FKKLGPSPSV KFRQLALQRD DFSRSIHSDN HDKHEHFRLI
101: RKINWGHLWI MGKDWIRQPL NMALFVWIAV VSVSGAILFM VMTGMLNHAL PSKSQRDAWF EVNNQILNAL FTLMCLYQHP MRIYNFVLLC RWNQKDILRL
201: RKEYCKNGTY KPNEWMHMMV VVAFLNLNCF AQYALCGLNI GYRRSERPPL GVAVTISFAF GAALFASVYN IVSPLGKDYD AEPREGDPEA QAEVTSTEGT
301: RPATSGRSLE RRYSFLQSEE RRFVESRPEW VGGLSDFWDS ITIAYLSIFC SCCVFGWNVQ RLGFGNMYVH IATFLLFCLA PFFIFNLAAV NINNETLREA
401: LGLTGIALCF FGLLYGGFWR IQMRKRFNLP GNPFCCRNPD VTDCFQWLFC CSCSLAQEVR TADYYDIAEE RSYRGQVTEE SQRVMSPLAR EDGLPLFKST
501: PASPYRGSTA GQSIFIMESP SAPRRSSGAT PLGSSPANGD TGMKAPAPSV VHREGEDES

Best Arabidopsis Sequence Match ( AT3G10980.1 )
(BLAST)

001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA

Arabidopsis Description

PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.