CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, vacuole, plasma membrane

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65507	Soybean	plasma membrane	73.35	49.82
Zm00001d052297_P001	Maize	plasma membrane	40.11	34.16
OQU78568	Sorghum	plasma membrane, plastid	40.37	32.83
GSMUA_AchrUn_...	Banana	cytosol	46.7	32.36
KRH73231	Soybean	nucleus	46.7	31.72
KRH31210	Soybean	cytosol	45.91	30.8
EES19686	Sorghum	cytosol, nucleus, peroxisome	45.91	30.74
Os05t0474900-01	Rice	plasma membrane	44.85	30.69
KRG97664	Soybean	cytosol, nucleus, peroxisome	43.27	30.43
Zm00001d010607_P001	Maize	cytosol, nucleus, plasma membrane, plastid	44.85	30.09
TraesCS1D01G292600.1	Wheat	cytosol, nucleus, plasma membrane, plastid	44.33	29.89
TraesCS1A01G298700.1	Wheat	cytosol, nucleus, plasma membrane, plastid	44.06	29.72
TraesCS1B01G308300.1	Wheat	cytosol, peroxisome, plasma membrane	44.06	29.72
HORVU1Hr1G070270.1	Barley	cytosol, peroxisome, plasma membrane	43.8	29.7
GSMUA_Achr8P21270_001	Banana	cytosol	30.61	28.5
TraesCS3D01G542600.1	Wheat	plasma membrane	42.22	28.07
TraesCS3B01G602800.1	Wheat	plasma membrane	41.69	26.33
TraesCS3A01G537100.1	Wheat	cytosol, nucleus, plasma membrane	41.95	26.02
HORVU3Hr1G117910.1	Barley	cytosol, nucleus, plasma membrane	41.42	25.65

Protein Annotations

EMBL:ACUP02000554	EnsemblPlants:KRH76069	EnsemblPlantsGene:GLYMA_01G128800	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:PLAC_motif_containing	PANTHER:PTHR31045	PANTHER:PTHR31045:SF15	PFAM:PF04749	ProteinID:KRH76069	ProteinID:KRH76069.1
SEG:seg	TIGRFAMs:TIGR01571	TMHMM:TMhelix	UniParc:UPI0006EE0F01	UniProt:A0A0R0LH79	MapMan:35.2

Description

hypothetical protein

Coordinates

chr1:-:44205034..44206626

Molecular Weight (calculated)

42187.8 Da

IEP (calculated)

8.611

GRAVY (calculated)

0.156

Length

379 amino acids

Sequence
(BLAST)

001: MIHAPIGGSL QEGLQDAALV GNTNGFKVNV NSALQTSSSQ RKLLSDESNH NPLNMAILQR IICVAVSGAI LFLVMTGILS KILNKQWKPK GIIFLRKIYC
101: KNGTCKPHER VHMMVVVVLL HVNCFSQYAL CGLKWGFNRS ERPVVGVGIC ISIAIAAPAL AGVNCIASPI GKDFCVVGRN LEKLHFGNKY VHIATFLLFC
201: VAPFWILNTV TINIDNEPVR VVLGLLGMLL CVFGLLYGGY WRIQMRGKFN LPPNKLCCGK PAVTDCIQWL LCCWCSLAQE VRTAEYYDIV DDKFFCQKLT
301: QSCVKPALNS LPPEDKAPQV TSKSTSFWSS HTVNKIWSQE SNDYSSLSEI EFSRERKQNV MEAPILQTIQ VDDNDIKRT

Best Arabidopsis Sequence Match ( AT5G05350.1 )
(BLAST)

001: MGSVDEVEIS KTRVSCPPAL STSHKILISE EKPRRWSESS LPDVSNRIKL LKFGSPSARL KRMAEERDEV SRSVNSSSSS SHDVVSSRKI EWACLMKMGK
101: QWLQNPLNMV MFLWIFVVAV SGAILFMVMT GMLNHALPKK SQRDVWFEVN NQILNALFTL MCLYQHPKRF YHLVLLCRWK QDDVTTLRKI FCKNGTYKPN
201: EWIHMMVVVL LLHLNCFAQY ALCGLNLGYR RSERPAIGVA ICISFAIAAP TAAGLYTILS PLGKDYDPQG DEENQVQAVG EGPVSNRKLS LERRYSFASN
301: DVSNPEWREG VLDIWEDISL AYLSLFCTFC LFGWNMERIG FGNMYVHIAT FVLFCLAPFF IFNLAAINID NEMVRDALGY TGIVLCLFGL LYGGFWRIQM
401: RKRFKLPGYN ICCGRPAIAD CTLWLFCCWC SLAQEVRTAN SYEIVEDKFC KRREENSKID DEVVVSALPR EDGVFDPSCL PKKMTTTMIA SSTLSPSRQK
501: DETCLGEKGD EALSPPSPPF IHREAS

Arabidopsis Description

PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q5XV52]
SUBAcon: [peroxisome,plastid,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.