Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG22798 | Sorghum | cytosol, peroxisome, plasma membrane | 37.75 | 42.19 |
| Zm00001d023227_P001 | Maize | plasma membrane | 37.39 | 41.28 |
| TraesCS5B01G148500.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.02 | 40.56 |
| TraesCS5A01G149900.1 | Wheat | cytosol, peroxisome, plasma membrane | 36.66 | 40.24 |
| TraesCS5D01G143100.1 | Wheat | cytosol, peroxisome, plasma membrane | 36.66 | 40.24 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plasma membrane | 35.93 | 39.21 |
| GSMUA_Achr11P... | Banana | mitochondrion | 36.12 | 36.05 |
| HORVU5Hr1G047240.2 | Barley | endoplasmic reticulum | 31.58 | 36.02 |
| GSMUA_AchrUn_... | Banana | cytosol | 35.75 | 36.01 |
| GSMUA_Achr8P21270_001 | Banana | cytosol | 25.23 | 34.15 |
| Os12t0109633-00 | Rice | cytosol, nucleus, plasma membrane | 28.13 | 33.48 |
| GSMUA_Achr7P22250_001 | Banana | endoplasmic reticulum, plasma membrane | 10.34 | 32.39 |
| GSMUA_Achr7P22270_001 | Banana | endoplasmic reticulum, plasma membrane | 10.34 | 32.39 |
| GSMUA_Achr5P28010_001 | Banana | cytosol, peroxisome, plasma membrane | 28.13 | 29.64 |
| GSMUA_Achr11P... | Banana | nucleus | 33.58 | 19.74 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P19720_001 | EnsemblPlants:GSMUA_Achr11T19720_001 | EnsemblPlantsGene:GSMUA_Achr11G19720_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF5 | PFAM:PF04749 | PFAM:PF11204 |
| SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI000294A1A0 | UniProt:M0RTQ2 | MapMan:35.2 |
Description
SAG20, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G19720_001]
Coordinates
chr11:-:20802493..20804367
Molecular Weight (calculated)
62271.5 Da
IEP (calculated)
8.679
GRAVY (calculated)
-0.126
Length
551 amino acids
Sequence
(BLAST)
(BLAST)
001: MESNGSRQST EDTKAAIEKS ERSMTTKLSC CIRRKEEQFL DRTRHVRRFL DFLKAQPSKD WFLRFGSVGR SSPFTFVKRI GSQRGGSSPP DCAPVHGCRP
101: LRVPFVRRIN WEGLITYCKN WVKHPMNMAL LVWLFFVAVG LFVLFLFMTG LLDHTIPKSS QRKRWTEITN QIVNALFTIM CIYQHPKLFH HLVLLCRWTS
201: TDVAELRKVY SKNGAPRPNE WAHMMLVVLL LHTTCFSQYG LCGLYWGYSS DSRPTWPQIL FIVLGIAAPV AAGIYAVYGP LGKKQESETD VESRQMAVAA
301: APDTDLLKTR NKSVVITKPE WVGGLFDCWD DPTVASLSVF CTLCVFGWNM ERLGFGNIYT TGITGILLCF CGLLYGGFWR IQMRKRFKLP ANPFCCGYPA
401: MTDFMQWLFC WSCSLAQEVR TGNLYDIEED SFHQKGGEDE SSKVHPLPRE GGMGPLMESS SLAHSHSNPH TGKSNSKPDS NGTATNCVRI NIDEAACGGE
501: KDDSMTPPLQ PLRKLLLGNH KVISTCIRNI VNMLSDAYLR NVILVHSFCY C
101: LRVPFVRRIN WEGLITYCKN WVKHPMNMAL LVWLFFVAVG LFVLFLFMTG LLDHTIPKSS QRKRWTEITN QIVNALFTIM CIYQHPKLFH HLVLLCRWTS
201: TDVAELRKVY SKNGAPRPNE WAHMMLVVLL LHTTCFSQYG LCGLYWGYSS DSRPTWPQIL FIVLGIAAPV AAGIYAVYGP LGKKQESETD VESRQMAVAA
301: APDTDLLKTR NKSVVITKPE WVGGLFDCWD DPTVASLSVF CTLCVFGWNM ERLGFGNIYT TGITGILLCF CGLLYGGFWR IQMRKRFKLP ANPFCCGYPA
401: MTDFMQWLFC WSCSLAQEVR TGNLYDIEED SFHQKGGEDE SSKVHPLPRE GGMGPLMESS SLAHSHSNPH TGKSNSKPDS NGTATNCVRI NIDEAACGGE
501: KDDSMTPPLQ PLRKLLLGNH KVISTCIRNI VNMLSDAYLR NVILVHSFCY C
001: MGSVDEVEIS KTRVSCPPAL STSHKILISE EKPRRWSESS LPDVSNRIKL LKFGSPSARL KRMAEERDEV SRSVNSSSSS SHDVVSSRKI EWACLMKMGK
101: QWLQNPLNMV MFLWIFVVAV SGAILFMVMT GMLNHALPKK SQRDVWFEVN NQILNALFTL MCLYQHPKRF YHLVLLCRWK QDDVTTLRKI FCKNGTYKPN
201: EWIHMMVVVL LLHLNCFAQY ALCGLNLGYR RSERPAIGVA ICISFAIAAP TAAGLYTILS PLGKDYDPQG DEENQVQAVG EGPVSNRKLS LERRYSFASN
301: DVSNPEWREG VLDIWEDISL AYLSLFCTFC LFGWNMERIG FGNMYVHIAT FVLFCLAPFF IFNLAAINID NEMVRDALGY TGIVLCLFGL LYGGFWRIQM
401: RKRFKLPGYN ICCGRPAIAD CTLWLFCCWC SLAQEVRTAN SYEIVEDKFC KRREENSKID DEVVVSALPR EDGVFDPSCL PKKMTTTMIA SSTLSPSRQK
501: DETCLGEKGD EALSPPSPPF IHREAS
101: QWLQNPLNMV MFLWIFVVAV SGAILFMVMT GMLNHALPKK SQRDVWFEVN NQILNALFTL MCLYQHPKRF YHLVLLCRWK QDDVTTLRKI FCKNGTYKPN
201: EWIHMMVVVL LLHLNCFAQY ALCGLNLGYR RSERPAIGVA ICISFAIAAP TAAGLYTILS PLGKDYDPQG DEENQVQAVG EGPVSNRKLS LERRYSFASN
301: DVSNPEWREG VLDIWEDISL AYLSLFCTFC LFGWNMERIG FGNMYVHIAT FVLFCLAPFF IFNLAAINID NEMVRDALGY TGIVLCLFGL LYGGFWRIQM
401: RKRFKLPGYN ICCGRPAIAD CTLWLFCCWC SLAQEVRTAN SYEIVEDKFC KRREENSKID DEVVVSALPR EDGVFDPSCL PKKMTTTMIA SSTLSPSRQK
501: DETCLGEKGD EALSPPSPPF IHREAS
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q5XV52]
SUBAcon: [peroxisome,plastid,cytosol,plasma membrane]
SUBAcon: [peroxisome,plastid,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.