Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d038030_P001 | Maize | cytosol, nucleus, plasma membrane | 74.9 | 73.04 |
Os05t0341900-00 | Rice | plasma membrane | 56.86 | 55.66 |
HORVU6Hr1G024570.1 | Barley | plasma membrane | 51.57 | 53.46 |
TraesCS6B01G156100.1 | Wheat | plasma membrane | 51.37 | 52.09 |
TraesCS6A01G127700.1 | Wheat | peroxisome, plasma membrane, vacuole | 50.98 | 51.69 |
TraesCS6D01G117700.1 | Wheat | plasma membrane | 50.39 | 51.09 |
EES01683 | Sorghum | cytosol, peroxisome, plasma membrane | 38.63 | 38.4 |
GSMUA_Achr11P... | Banana | cytosol, nucleus, plasma membrane | 37.65 | 38.02 |
KXG22798 | Sorghum | cytosol, peroxisome, plasma membrane | 36.47 | 37.73 |
OQU78568 | Sorghum | plasma membrane, plastid | 30.59 | 33.48 |
KXG22799 | Sorghum | mitochondrion | 39.61 | 32.42 |
EER92399 | Sorghum | cytosol, nucleus, plasma membrane | 36.27 | 32.23 |
EES19686 | Sorghum | cytosol, nucleus, peroxisome | 30.39 | 27.39 |
GSMUA_Achr5P28010_001 | Banana | cytosol, peroxisome, plasma membrane | 25.49 | 24.86 |
GSMUA_Achr11P... | Banana | nucleus | 34.51 | 18.78 |
Protein Annotations
EnsemblPlants:EES18024 | EnsemblPlantsGene:SORBI_3009G100100 | EntrezGene:8066775 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF8 | PFAM:PF04749 | PFAM:PF11204 |
ProteinID:EES18024 | ProteinID:EES18024.1 | RefSeq:XP_002439594.1 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix |
UniParc:UPI0001A88BCD | UniProt:C5YW73 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:39138168..39140024
Molecular Weight (calculated)
55638.3 Da
IEP (calculated)
7.953
GRAVY (calculated)
-0.131
Length
510 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAVDNSRHD QDHHAAAAFS VELEVELVGE GNNGAATTRT VPEQEDPEPR TEGRRRPAGR ARRLARRLHP ATVARACWRW LKHPAHLALV AWALCVAASG
101: TMLVLLLLGS LNSAIPRRSI RNRWIEINNQ VLNALFTLMS IYQHPALFHH AAHLLRWRPA DAKELREAYC RKSAGAGARR GDRVHMSVVV ALLHAACFSQ
201: YAMCGLYWGY SRRARPDDAL TSLTVVGTVT PVVAGLYMYF SPLGRKRGGR SVRQDPDERS AASSDVEVAV GAEWAGGLLD VGDDPTVCWF SCLCTFCVFG
301: WNMERLGFGN AHVHTAMFAL LCFAPLWVLS AAALNIRDDD VGFAVGVTGV VLCALGLLYG GFWRARMRRK YGLPSTNACC AASPSLADYG QWMFCWSCAL
401: AQEVRTADIL LDVEAGSVNR PDSDGRRVDA ADAQALQPLP RESGVKSFHQ GGSSNLAEPA TIDTHSVQLS SYRTSRGDES PLLLHDQGSR ASSGEMTPPV
501: PPSIPEGERR
101: TMLVLLLLGS LNSAIPRRSI RNRWIEINNQ VLNALFTLMS IYQHPALFHH AAHLLRWRPA DAKELREAYC RKSAGAGARR GDRVHMSVVV ALLHAACFSQ
201: YAMCGLYWGY SRRARPDDAL TSLTVVGTVT PVVAGLYMYF SPLGRKRGGR SVRQDPDERS AASSDVEVAV GAEWAGGLLD VGDDPTVCWF SCLCTFCVFG
301: WNMERLGFGN AHVHTAMFAL LCFAPLWVLS AAALNIRDDD VGFAVGVTGV VLCALGLLYG GFWRARMRRK YGLPSTNACC AASPSLADYG QWMFCWSCAL
401: AQEVRTADIL LDVEAGSVNR PDSDGRRVDA ADAQALQPLP RESGVKSFHQ GGSSNLAEPA TIDTHSVQLS SYRTSRGDES PLLLHDQGSR ASSGEMTPPV
501: PPSIPEGERR
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.