Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES18024 | Sorghum | cytosol, nucleus, plasma membrane | 73.04 | 74.9 |
| Os05t0341900-00 | Rice | plasma membrane | 57.36 | 57.58 |
| HORVU6Hr1G024570.1 | Barley | plasma membrane | 51.43 | 54.67 |
| TraesCS6B01G156100.1 | Wheat | plasma membrane | 51.43 | 53.48 |
| TraesCS6A01G127700.1 | Wheat | peroxisome, plasma membrane, vacuole | 50.48 | 52.49 |
| TraesCS6D01G117700.1 | Wheat | plasma membrane | 49.9 | 51.89 |
| Zm00001d043026_P001 | Maize | cytosol, peroxisome, plasma membrane | 40.54 | 39.26 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plasma membrane | 37.48 | 38.81 |
| Zm00001d023228_P001 | Maize | plasma membrane | 40.92 | 37.48 |
| Zm00001d023227_P001 | Maize | plasma membrane | 34.8 | 36.47 |
| Zm00001d052297_P001 | Maize | plasma membrane | 30.02 | 35.28 |
| Zm00001d028809_P001 | Maize | nucleus, peroxisome, plasma membrane | 37.09 | 34.4 |
| Zm00001d010607_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 30.21 | 27.96 |
| GSMUA_Achr5P28010_001 | Banana | cytosol, peroxisome, plasma membrane | 26.2 | 26.2 |
| GSMUA_Achr11P... | Banana | nucleus | 36.52 | 20.38 |
Protein Annotations
| EnsemblPlants:Zm00001d038030_P001 | EnsemblPlants:Zm00001d038030_T001 | EnsemblPlantsGene:Zm00001d038030 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF8 | PFAM:PF04749 | PFAM:PF11204 |
| ProteinID:AQK85492.1 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI000220801A | UniProt:A0A1D6M2T4 |
| MapMan:35.2 | : | : | : | : | : |
Description
SAG20
Coordinates
chr6:-:145631230..145632801
Molecular Weight (calculated)
57273.4 Da
IEP (calculated)
8.493
GRAVY (calculated)
-0.124
Length
523 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSVDNSRHD QDHHADVAFS VELEAELVEG HGNGAAAPTR TRTVLEQEEP EPRTEGRRRP GRARRLARRL HPATVARACW RWLKHPAHLA LVAWALCVAA
101: SGSMLALLLL GSLNRAFPRR SLRNRWIEIN NQVLNALFTL MSIYQHPALF HHAVLLLRWR PGDAKELREA YCRKKGAAAG SRRGERAHVS VVVALLHVAC
201: LAQYAMCGLY WGYSRRARPD AALTALTVVG TAAPVIAGLY IYFSPLGRKR GGRSVHHEPD ERSDHSDGTV AVEVAAGADW AGGLLDVGDD PTACWLSCLC
301: TFCVFGWNVE RLGFGNAHVH AVMFALLCFA PLWVLSVAAL NIRDDDVGFA VGVAGVVLCA LGLLYGGFWR ARMRRRYGLP ATNACCCCAA APSLADYARW
401: MFCWGCALAQ EVRTANLLLL DVEAGSVGRR DSDGRRVDAD AQTLQPLPRE SGVKSFHQGG SSHPAKPATT DAHSVQLSNY STSSQGDESP LLWQYQVTRS
501: SSREMTPPVP PSIPEAERRR VQE
101: SGSMLALLLL GSLNRAFPRR SLRNRWIEIN NQVLNALFTL MSIYQHPALF HHAVLLLRWR PGDAKELREA YCRKKGAAAG SRRGERAHVS VVVALLHVAC
201: LAQYAMCGLY WGYSRRARPD AALTALTVVG TAAPVIAGLY IYFSPLGRKR GGRSVHHEPD ERSDHSDGTV AVEVAAGADW AGGLLDVGDD PTACWLSCLC
301: TFCVFGWNVE RLGFGNAHVH AVMFALLCFA PLWVLSVAAL NIRDDDVGFA VGVAGVVLCA LGLLYGGFWR ARMRRRYGLP ATNACCCCAA APSLADYARW
401: MFCWGCALAQ EVRTANLLLL DVEAGSVGRR DSDGRRVDAD AQTLQPLPRE SGVKSFHQGG SSHPAKPATT DAHSVQLSNY STSSQGDESP LLWQYQVTRS
501: SSREMTPPVP PSIPEAERRR VQE
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.