Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G379000.1 | Wheat | cytosol, peroxisome, plasma membrane | 80.71 | 88.72 |
| TraesCS3D01G340900.1 | Wheat | cytosol, peroxisome, plasma membrane | 78.76 | 86.41 |
| Os01t0825900-01 | Rice | cytosol | 61.42 | 66.1 |
| EES01683 | Sorghum | cytosol, peroxisome, plasma membrane | 60.0 | 66.08 |
| Zm00001d043026_P001 | Maize | cytosol, peroxisome, plasma membrane | 55.4 | 57.96 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plasma membrane | 40.71 | 45.54 |
| TraesCS6A01G127700.1 | Wheat | peroxisome, plasma membrane, vacuole | 35.75 | 40.16 |
| TraesCS5A01G149900.1 | Wheat | cytosol, peroxisome, plasma membrane | 34.51 | 38.84 |
| TraesCS5A01G149800.1 | Wheat | plasma membrane, plastid | 37.52 | 35.99 |
| TraesCS4A01G115700.1 | Wheat | nucleus, peroxisome, plasma membrane | 34.87 | 34.74 |
| GSMUA_Achr5P28010_001 | Banana | cytosol, peroxisome, plasma membrane | 28.5 | 30.78 |
| TraesCS1A01G298700.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 29.73 | 29.89 |
| TraesCS3A01G537100.1 | Wheat | cytosol, nucleus, plasma membrane | 29.2 | 27.0 |
| GSMUA_Achr11P... | Banana | nucleus | 38.58 | 23.27 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G347300.1 | EnsemblPlantsGene:TraesCS3A01G347300 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF6 |
| PFAM:PF04749 | PFAM:PF11204 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr3A:+:596499542..596501239
Molecular Weight (calculated)
62898.1 Da
IEP (calculated)
6.562
GRAVY (calculated)
0.097
Length
565 amino acids
Sequence
(BLAST)
(BLAST)
001: MPEIQGSNPV FFCTFIAERL LQYASLQVHH PVSLRNQIAQ ISFTRKKMGH TVAEDDIEDI PSSDANSPIL TEHHITVPTL HDGLMQGEHQ HERRLLDFLK
101: ATPSVQWLKD INVCAPLGKI QLPSIGVHRY LHVHFIRTVD WSSLLAICKN HLKHPLNIAL LIWLLCVAAA GAMLGLLLLG LLNKAFPSRA LRHHWIEIDN
201: QILNALFTLM SIYQHPILVH HLVLLCRWRP EDAAQLRKLY CKNGARRPNE RAHMSFVVAL LHVTCISQYM ECSLYWGYPS RSRSEFAENF FFILGVSAPV
301: VAGAHMVYSP LGRDDDDDAA ASCEETKQLH LHAAAGAEES PEERTAVGNP MWAGELLDCG EDPAACYLSF LCTFCVFGWN MERLGLGNMY VHTAMFLLLC
401: VAPFWVFNVT ALSIHDYVLS DAFGAAGVVL CFLGLLYGGF WRIQMRKRLG LPRSRWCCGS SSLTDYAQWL LCWPCALAQE VRTANLYGLR DDGGFYGKLV
501: DGGDPERGPD VPVSVGVREG IDAAVHLAVD GEMIPPVQPV VESGRQRQAG DEEIVANGSS VQLKS
101: ATPSVQWLKD INVCAPLGKI QLPSIGVHRY LHVHFIRTVD WSSLLAICKN HLKHPLNIAL LIWLLCVAAA GAMLGLLLLG LLNKAFPSRA LRHHWIEIDN
201: QILNALFTLM SIYQHPILVH HLVLLCRWRP EDAAQLRKLY CKNGARRPNE RAHMSFVVAL LHVTCISQYM ECSLYWGYPS RSRSEFAENF FFILGVSAPV
301: VAGAHMVYSP LGRDDDDDAA ASCEETKQLH LHAAAGAEES PEERTAVGNP MWAGELLDCG EDPAACYLSF LCTFCVFGWN MERLGLGNMY VHTAMFLLLC
401: VAPFWVFNVT ALSIHDYVLS DAFGAAGVVL CFLGLLYGGF WRIQMRKRLG LPRSRWCCGS SSLTDYAQWL LCWPCALAQE VRTANLYGLR DDGGFYGKLV
501: DGGDPERGPD VPVSVGVREG IDAAVHLAVD GEMIPPVQPV VESGRQRQAG DEEIVANGSS VQLKS
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.