Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G149800.1 | Wheat | plasma membrane, plastid | 80.26 | 73.85 |
| HORVU5Hr1G047230.1 | Barley | plasma membrane | 68.08 | 67.83 |
| TraesCS5D01G143200.1 | Wheat | plasma membrane | 68.08 | 67.83 |
| Zm00001d023228_P001 | Maize | plasma membrane | 49.63 | 47.11 |
| Os11t0109700-02 | Rice | plasma membrane | 47.97 | 47.02 |
| KXG22799 | Sorghum | mitochondrion | 47.97 | 41.73 |
| TraesCS3B01G379000.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.82 | 39.88 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plasma membrane | 35.06 | 37.62 |
| TraesCS5B01G148500.1 | Wheat | cytosol, peroxisome, plasma membrane | 34.13 | 36.78 |
| TraesCS6B01G156100.1 | Wheat | plasma membrane | 32.84 | 35.39 |
| TraesCS4B01G188300.1 | Wheat | plasma membrane | 30.07 | 30.35 |
| TraesCS1B01G115100.1 | Wheat | nucleus, peroxisome, plasma membrane | 31.0 | 29.63 |
| GSMUA_Achr5P28010_001 | Banana | cytosol, peroxisome, plasma membrane | 26.38 | 27.34 |
| TraesCS3B01G602800.1 | Wheat | plasma membrane | 29.52 | 26.67 |
| TraesCS1B01G308300.1 | Wheat | cytosol, peroxisome, plasma membrane | 26.01 | 25.09 |
| GSMUA_Achr11P... | Banana | nucleus | 36.16 | 20.92 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G148400.1 | EnsemblPlantsGene:TraesCS5B01G148400 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF6 |
| PFAM:PF04749 | PFAM:PF11204 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr5B:+:276799708..276801336
Molecular Weight (calculated)
58457.9 Da
IEP (calculated)
6.634
GRAVY (calculated)
0.266
Length
542 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLPRDSNGD DARAPLLASY RVPLPPADPL LDKPRRPEWL SFLRDGRTSE VDWGSVGATC REWIKHPMNI ALLLWLLCVG AFGGMLVLLL LGLLDRAFSA
101: PAARAHWVEV NNQVLNALFT LMSLYQHPPL FHHVFLLGRW RLPGDAAELR AAYCGKGGGP PRRGERAHMA VVVALFHLTV VCQNALCWLY WGFTERSRPE
201: LVEDGFLALG VGAPVAAVVY TVCSPLGKDP CGDLAACPDA ASVTQQCPTA PTKAAHGVVV VEPEWAGGMF DCGGDAAAGC CLSLSCTFCV FGWNAERLGF
301: GNACVHATTF ALLCFAPLWV LGVTALRVHD VAVGDVVGGA GVLLCAGGLL YGGYWRVQMR RRFRLPGSAG CCGSKSATDY ARWLFCWPCA LAQEVRTASR
401: YHIEGESLFH RKAAAAATTD EPLLIAPHRI AIAASDHEGS SKSDGHLVVV VHDELVPPAV VQVVAAGDDD TCEQCNVVRV EKKIEAIDVV EEDESSLLAS
501: NGEMVDHGLS GGRWRVEKVR RMISVVTMLS LLVLLYTRGF IL
101: PAARAHWVEV NNQVLNALFT LMSLYQHPPL FHHVFLLGRW RLPGDAAELR AAYCGKGGGP PRRGERAHMA VVVALFHLTV VCQNALCWLY WGFTERSRPE
201: LVEDGFLALG VGAPVAAVVY TVCSPLGKDP CGDLAACPDA ASVTQQCPTA PTKAAHGVVV VEPEWAGGMF DCGGDAAAGC CLSLSCTFCV FGWNAERLGF
301: GNACVHATTF ALLCFAPLWV LGVTALRVHD VAVGDVVGGA GVLLCAGGLL YGGYWRVQMR RRFRLPGSAG CCGSKSATDY ARWLFCWPCA LAQEVRTASR
401: YHIEGESLFH RKAAAAATTD EPLLIAPHRI AIAASDHEGS SKSDGHLVVV VHDELVPPAV VQVVAAGDDD TCEQCNVVRV EKKIEAIDVV EEDESSLLAS
501: NGEMVDHGLS GGRWRVEKVR RMISVVTMLS LLVLLYTRGF IL
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.