Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G189700.1 | Wheat | nucleus, peroxisome, plasma membrane | 90.65 | 91.3 |
| TraesCS4A01G115700.1 | Wheat | nucleus, peroxisome, plasma membrane | 87.83 | 87.83 |
| TraesCS4B01G188300.1 | Wheat | plasma membrane | 78.66 | 83.05 |
| HORVU4Hr1G054940.1 | Barley | cytosol | 78.66 | 77.97 |
| Zm00001d028809_P001 | Maize | nucleus, peroxisome, plasma membrane | 65.61 | 65.96 |
| EER92399 | Sorghum | cytosol, nucleus, plasma membrane | 66.31 | 65.51 |
| Os03t0299800-01 | Rice | mitochondrion | 68.43 | 63.61 |
| TraesCS5B01G148500.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.57 | 42.35 |
| TraesCS3B01G379000.1 | Wheat | cytosol, peroxisome, plasma membrane | 35.45 | 39.11 |
| GSMUA_Achr7P22250_001 | Banana | endoplasmic reticulum, plasma membrane | 11.64 | 37.5 |
| GSMUA_Achr7P22270_001 | Banana | endoplasmic reticulum, plasma membrane | 11.64 | 37.5 |
| TraesCS6B01G156100.1 | Wheat | plasma membrane | 31.39 | 35.39 |
| TraesCS3B01G602800.1 | Wheat | plasma membrane | 33.69 | 31.83 |
| TraesCS5B01G148400.1 | Wheat | plasma membrane | 29.63 | 31.0 |
| TraesCS1B01G308300.1 | Wheat | cytosol, peroxisome, plasma membrane | 30.34 | 30.61 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G115100.1 | EnsemblPlantsGene:TraesCS1B01G115100 | InterPro:DUF2985 | InterPro:PLAC_motif_containing | PANTHER:PTHR31045 | PANTHER:PTHR31045:SF5 |
| PFAM:PF04749 | PFAM:PF11204 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr1B:-:135244874..135246756
Molecular Weight (calculated)
63241.6 Da
IEP (calculated)
8.889
GRAVY (calculated)
-0.067
Length
567 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPNDASRGG EIVEVVVGEP ASPSAAMRLM DFIPIYIPTV EKGALSRGAR KTRFLDFLRA RPSKKWFLRS TFVGRLRRRS QVTAGDEEDG RDSDGNAGGC
101: RPRRRRRRFR VPFVRKIRWG KLWTHVVSWC RRPANFAMII WLAFVAAGLL LLFLLMTGLL DDAIPGDDWR KKWSEVINQI LNALFTIMCL YQHPRIFHHL
201: VLLLRWRPDG DREAIRKVYC KEGAPVPPRD RAHMLVVVAL LHITCLAQYF CCALFWSYSR TDRPNWALNI GYGFGTGLPV IAALYLAYSP LGRKQARDPD
301: AEPSSSGEGA NGHGGAPENG GRDVEIRIYN RSVVVSRPEW SGGLCDCCDD GTVCALSATC TFCVFGWNME RLGFGNMYVH AFTFILLCVA PLLIFSVTAL
401: NVYDDDIRDT VVAVGVLLCF CGFLYGGYWR TQMRKRYKLP AGGGGRRAAV GDCAKWLFCW SCALAQEVRT ANFYDFDDDR FVGHGARNEE GRAVLVPLPR
501: EASTSTHSRS LSCPPKIDAM AALSGAGTGT LDEQMVDIAM GRLATYNGYG DAMSPPLPPL IQMHREN
101: RPRRRRRRFR VPFVRKIRWG KLWTHVVSWC RRPANFAMII WLAFVAAGLL LLFLLMTGLL DDAIPGDDWR KKWSEVINQI LNALFTIMCL YQHPRIFHHL
201: VLLLRWRPDG DREAIRKVYC KEGAPVPPRD RAHMLVVVAL LHITCLAQYF CCALFWSYSR TDRPNWALNI GYGFGTGLPV IAALYLAYSP LGRKQARDPD
301: AEPSSSGEGA NGHGGAPENG GRDVEIRIYN RSVVVSRPEW SGGLCDCCDD GTVCALSATC TFCVFGWNME RLGFGNMYVH AFTFILLCVA PLLIFSVTAL
401: NVYDDDIRDT VVAVGVLLCF CGFLYGGYWR TQMRKRYKLP AGGGGRRAAV GDCAKWLFCW SCALAQEVRT ANFYDFDDDR FVGHGARNEE GRAVLVPLPR
501: EASTSTHSRS LSCPPKIDAM AALSGAGTGT LDEQMVDIAM GRLATYNGYG DAMSPPLPPL IQMHREN
001: MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
101: RISGVLHRKI DWSSLMNMGK EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL MCLYQHPKRF YHLVLLCRWK
201: HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVAGLYTILS PLGKDYNDSN EDEENQLKQR
301: EEGSVNRRFT LERRYSFASA STGVGDGMVP VSDPQWSGGI LDIWDDISLA YLSLFCTFCV FGWNMERVGF GNMYVHIATF ILFCLAPFFI FNLAAVNIDN
401: ETVREALGIS GILLCVFGLL YGGFWRIQMR KRFKLPSYNF CFGRAAIADC ALWLCCCWCS LAQEVRTANS YEIVEDKFCQ RKEEKNMVSP NLVSPLPRED
501: GVFDPRFGLG SSPKNISGAS SPSPSRFWKE AHSPNVQTPR EKEEVKSDVA LTPPSPLSIH REA
Arabidopsis Description
PLAC8 family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4N1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.