CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH22291
KRH27037

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41410.1	KRH22291	AT2G42580.1	19000166
AT2G41410.1	KRH27037	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95139	Soybean	plastid	89.95	90.37
Bra016936.1-P	Field mustard	cytosol	28.31	59.05
AT3G10190.1	Thale cress	cytosol, mitochondrion	52.51	55.02
CDY14768	Canola	cytosol, mitochondrion, plastid	54.34	54.84
CDY06925	Canola	cytosol, mitochondrion, plastid	53.88	54.38
Bra029821.1-P	Field mustard	plastid	51.6	54.33
AT2G41410.1	Thale cress	cytosol, mitochondrion, plastid	53.42	54.17
CDY60169	Canola	cytosol, plastid	51.14	53.85
CDY23852	Canola	cytosol, mitochondrion, plastid	52.05	53.52
CDX79938	Canola	cytosol, mitochondrion, plastid	52.05	53.52
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	52.05	53.52
CDY00910	Canola	cytosol, plastid	52.05	52.29
VIT_08s0007g05790.t01	Wine grape	mitochondrion, plastid	52.51	51.8
TraesCS5B01G134200.1	Wheat	cytosol	21.0	51.11
PGSC0003DMT400021079	Potato	cytosol, mitochondrion, plastid	44.29	47.32
Solyc10g079420.1.1	Tomato	nucleus, plastid	44.29	47.32
PGSC0003DMT400027581	Potato	cytosol, plastid	45.21	45.83
PGSC0003DMT400076709	Potato	mitochondrion	43.84	45.5
GSMUA_Achr8P09680_001	Banana	plastid	41.1	44.55
Solyc04g018110.1.1	Tomato	plastid	46.12	41.74
Zm00001d004972_P001	Maize	plastid	34.25	40.11
Os11t0141400-01	Rice	cytosol	34.25	39.89
TraesCS3A01G488700.1	Wheat	nucleus, plastid	34.7	39.58
Zm00001d042108_P001	Maize	cytosol, plastid	34.7	39.58
TraesCS3B01G536600.1	Wheat	nucleus, plastid	35.16	39.09
TraesCS3D01G484600.1	Wheat	cytosol, plastid	34.7	38.97
EES02048	Sorghum	plastid	33.79	38.74
TraesCS5D01G141900.1	Wheat	plastid	31.96	38.25
KXG27695	Sorghum	plastid	34.25	38.07
HORVU5Hr1G043460.1	Barley	plastid	31.51	37.7
EES16521	Sorghum	plastid	36.07	36.92
Os01t0949300-01	Rice	plasma membrane	33.79	36.27
KRH30955	Soybean	cytosol	22.37	35.77
KRG97926	Soybean	cytosol	22.37	35.25
KRH73006	Soybean	cytosol	21.46	33.33
KRH17370	Soybean	cytosol	21.46	33.33
KRH29625	Soybean	cytosol	15.98	33.02
KRH75577	Soybean	cytosol	22.83	32.89
Os12t0138050-00	Rice	plastid	35.62	32.77
KRH49632	Soybean	cytosol, mitochondrion, plastid	26.94	32.42
KRH60410	Soybean	cytosol, plastid	26.94	31.38
GSMUA_Achr8P00110_001	Banana	endoplasmic reticulum, golgi	40.18	30.56
KRH37459	Soybean	cytosol	14.16	30.39
KRG95097	Soybean	cytosol	21.0	30.26
KRH66763	Soybean	cytosol	21.0	30.26
KRH76288	Soybean	plastid	28.31	28.97
KRH28478	Soybean	cytosol, plastid	24.2	28.34
KRH65252	Soybean	plastid	27.4	28.04
KRH48613	Soybean	cytosol	22.83	27.93
KRH76994	Soybean	cytosol, plastid	23.74	27.81
HORVU3Hr1G106950.3	Barley	cytosol	34.25	27.78
KRH00581	Soybean	plastid	27.85	27.35
KRH57807	Soybean	plastid	23.29	26.98
KRH41828	Soybean	cytosol	21.92	26.67
KRH50269	Soybean	mitochondrion	21.92	25.95
KRH04628	Soybean	plastid	22.37	25.79
KRH24162	Soybean	cytosol	16.44	25.71
KRH71148	Soybean	cytosol	21.46	25.41
KRH40630	Soybean	mitochondrion	21.0	25.14
KRH02767	Soybean	cytosol	17.35	25.0
KRH23209	Soybean	cytosol, mitochondrion	21.0	25.0
KRH15405	Soybean	cytosol	16.44	25.0
KRH20147	Soybean	extracellular	25.11	24.02
KRH03663	Soybean	endoplasmic reticulum, extracellular	24.66	23.58
KRH24625	Soybean	cytosol	22.83	22.62
KRH60530	Soybean	plastid	21.92	22.22
KRH16247	Soybean	cytosol	13.24	22.14
KRH10131	Soybean	endoplasmic reticulum	21.0	21.8

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100790734	MapMan:35.1	EMBL:ACUP02002014	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_03G130800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	UniProt:I1JN81
InterPro:IPR002048	EnsemblPlants:KRH66816	ProteinID:KRH66816	ProteinID:KRH66816.1	PFAM:PF13202	PFAM:PF13499
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF739	SMART:SM00054	SUPFAM:SSF47473
UniParc:UPI0002339EAC	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:34589493..34590784

Molecular Weight (calculated)

23933.0 Da

IEP (calculated)

4.351

GRAVY (calculated)

-0.431

Length

219 amino acids

Sequence
(BLAST)

001: MKLISTINPK NLKLSPKRFF RKKEPSLVSR SDPPSFGSGS SSVDSSTANH KPSPGNQTPT SVLPDVSGEW SEVAAAAVDV RWDLAQALRL IDRDNDGVVT
101: RQDLESLLTR LGASPSPGDV ALMLGEVDGD GITVESLMSY VGSGLETGSD PDELKEAFEV FDTDRDGRIS AEELLRVFKA IGDERCTLEE CRRMIEGVDR
201: NGDGFVCFED FSRMMDLQR

Best Arabidopsis Sequence Match ( AT3G10190.1 )
(BLAST)

001: MKLAKLIPKR FFIRSKDRST VSKSPTAFSF GSASSSSGQD CKNSGGDGGG GSVTPTSILP EVPSPYSYVE ILQAFKLIDR DNDGAVSRHD LESLLSRLGP
101: DPLTEEEINV MLKEVDCDGD GTIRLEELAS RVVSLDPARD STELKETFEF FDADRDGLIS ADELLRVFST IGDERCTLDD CKRMIADVDE DGDGFVCFTE
201: FSRMMDLQR

Arabidopsis Description

CML36Probable calcium-binding protein CML36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS31]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.