CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g050750.1.1	Tomato	cytosol, unclear	64.13	78.67
KRH29625	Soybean	cytosol	45.11	78.3
PGSC0003DMT400018016	Potato	cytosol	63.59	78.0
KRG95097	Soybean	cytosol	61.96	75.0
KRH66763	Soybean	cytosol	61.96	75.0
KRH10131	Soybean	endoplasmic reticulum	77.72	67.77
Solyc11g044920.1.1	Tomato	cytosol	42.93	65.29
KRH24625	Soybean	cytosol	68.48	57.01
VIT_05s0102g00450.t01	Wine grape	endoplasmic reticulum, golgi	65.22	56.07
PGSC0003DMT400069195	Potato	golgi, plastid	65.76	55.25
KRH17370	Soybean	cytosol	30.98	40.43
KRH73006	Soybean	cytosol	30.43	39.72
KRH30955	Soybean	cytosol	29.35	39.42
KRG97926	Soybean	cytosol	29.35	38.85
KRH75577	Soybean	cytosol	30.98	37.5
KRH16247	Soybean	cytosol	24.46	34.35
KRH20147	Soybean	extracellular	42.39	34.06
KRH03663	Soybean	endoplasmic reticulum, extracellular	42.39	34.06
KRH60410	Soybean	cytosol, plastid	33.7	32.98
KRH24162	Soybean	cytosol	24.46	32.14
KRH37459	Soybean	cytosol	17.39	31.37
KRH49632	Soybean	cytosol, mitochondrion, plastid	30.98	31.32
KRH40630	Soybean	mitochondrion	30.98	31.15
KRH41828	Soybean	cytosol	30.43	31.11
KRH48613	Soybean	cytosol	29.89	30.73
KRH02767	Soybean	cytosol	24.46	29.61
KRH28478	Soybean	cytosol, plastid	29.35	28.88
KRH57807	Soybean	plastid	29.35	28.57
KRH15405	Soybean	cytosol	22.28	28.47
KRH04628	Soybean	plastid	28.8	27.89
KRH76994	Soybean	cytosol, plastid	28.26	27.81
KRH50269	Soybean	mitochondrion	26.63	26.49
KRH71148	Soybean	cytosol	26.63	26.49
KRH76288	Soybean	plastid	29.89	25.7
KRH00581	Soybean	plastid	30.98	25.56
KRH65252	Soybean	plastid	29.35	25.23
KRH60530	Soybean	plastid	29.35	25.0
KRH66816	Soybean	plastid	25.0	21.0
KRG95139	Soybean	plastid	24.46	20.64

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	UniProt:A0A0R0H759	EMBL:ACUP02008457	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_13G344200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048
EnsemblPlants:KRH23209	ProteinID:KRH23209	ProteinID:KRH23209.1	PFAM:PF13499	PFAM:PF13833	PRINTS:PR01697
ScanProsite:PS00018	PFscan:PS50222	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0003DEB96A	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:43525753..43527011

Molecular Weight (calculated)

21262.6 Da

IEP (calculated)

4.740

GRAVY (calculated)

-0.516

Length

184 amino acids

Sequence
(BLAST)

001: MSLKGLYYIF GIKKRMMRQE VVFWHPRGFK KRISMEAQEL KRVFQMFDRN GDGRITKKEL NDSLENLGIF ISDKDLSQMI QRIDVNGDGC VDMDEFGELY
101: QTIMDERDNE EDMREAFNVF DQNADGFITV DELRTVLSSL GLKQGRTVQD CKAMISKVDV DGDGMVDYKE FKQMMKGGGF TALT

Best Arabidopsis Sequence Match ( AT3G07490.1 )
(BLAST)

001: MDQAELARIF QMFDRNGDGK ITKQELNDSL ENLGIYIPDK DLVQMIEKID LNGDGYVDIE EFGGLYQTIM EERDEEEDMR EAFNVFDQNR DGFITVEELR
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL

Arabidopsis Description

CML3CML3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.