CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 2
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30955	Soybean	cytosol	96.4	97.81
KRH73006	Soybean	cytosol	79.14	78.01
KRH17370	Soybean	cytosol	76.98	75.89
PGSC0003DMT400026987	Potato	cytosol	66.19	63.45
Solyc02g063350.1.1	Tomato	cytosol	65.47	62.76
PGSC0003DMT400078654	Potato	cytosol	69.06	61.54
Solyc02g091500.1.1	Tomato	cytosol	68.35	60.9
VIT_14s0006g01400.t01	Wine grape	cytosol	63.31	58.67
Bra004165.1-P	Field mustard	cytosol	58.99	53.59
CDX96150	Canola	cytosol	58.99	53.59
CDY55679	Canola	cytosol	58.27	52.94
CDX99691	Canola	cytosol	58.27	51.27
CDY27652	Canola	cytosol	58.27	50.94
AT5G37770.1	Thale cress	cytosol	58.99	50.93
Bra025439.1-P	Field mustard	cytosol	58.27	50.62
AT1G66400.1	Thale cress	cytosol	56.12	49.68
KRH75577	Soybean	cytosol	48.2	44.08
KRH24162	Soybean	cytosol	43.88	43.57
KRH41828	Soybean	cytosol	53.24	41.11
KRH48613	Soybean	cytosol	52.52	40.78
KRH02767	Soybean	cytosol	43.17	39.47
KRH37459	Soybean	cytosol	28.78	39.22
KRH15405	Soybean	cytosol	40.29	38.89
KRH29625	Soybean	cytosol	28.78	37.74
KRH60410	Soybean	cytosol, plastid	49.64	36.7
KRH16247	Soybean	cytosol	34.53	36.64
KRH49632	Soybean	cytosol, mitochondrion, plastid	46.04	35.16
KRH66763	Soybean	cytosol	38.13	34.87
KRG95097	Soybean	cytosol	37.41	34.21
KRH60530	Soybean	plastid	51.08	32.87
KRH50269	Soybean	mitochondrion	43.17	32.43
KRH71148	Soybean	cytosol	42.45	31.89
KRH28478	Soybean	cytosol, plastid	41.01	30.48
KRH76994	Soybean	cytosol, plastid	40.29	29.95
KRH76288	Soybean	plastid	45.32	29.44
KRH23209	Soybean	cytosol, mitochondrion	38.85	29.35
KRH65252	Soybean	plastid	44.6	28.97
KRH00581	Soybean	plastid	46.04	28.7
KRH57807	Soybean	plastid	38.85	28.57
KRH04628	Soybean	plastid	38.85	28.42
KRH40630	Soybean	mitochondrion	35.97	27.32
KRH03663	Soybean	endoplasmic reticulum, extracellular	43.88	26.64
KRH20147	Soybean	extracellular	43.88	26.64
KRH10131	Soybean	endoplasmic reticulum	39.57	26.07
KRH24625	Soybean	cytosol	38.85	24.43
KRG95139	Soybean	plastid	35.97	22.94
KRH66816	Soybean	plastid	35.25	22.37

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100791597	MapMan:35.1	EMBL:ACUP02010826	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_18G039500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	UniProt:I1MZD8
InterPro:IPR002048	EnsemblPlants:KRG97926	ProteinID:KRG97926	ProteinID:KRG97926.1	PFAM:PF13499	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF573	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000233EB5E
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:3218263..3219353

Molecular Weight (calculated)

15622.5 Da

IEP (calculated)

4.717

GRAVY (calculated)

-0.733

Length

139 amino acids

Sequence
(BLAST)

001: MDEEEVRKIF SKFDKNGDGK ISCAELKEMM AALGSKTTSD EVKRMMAELD RNGDGYIDLK EFGEFHCGGG GDGRELREAF ELYDLDKNGL ISAKELHSVM
101: RRLGEKCSLS DCRRMIGNVD ADGDGNVNFE EFKKMMSRS

Best Arabidopsis Sequence Match ( AT5G37770.1 )
(BLAST)

001: MSSKNGVVRS CLGSMDDIKK VFQRFDKNGD GKISVDELKE VIRALSPTAS PEETVTMMKQ FDLDGNGFID LDEFVALFQI GIGGGGNNRN DVSDLKEAFE
101: LYDLDGNGRI SAKELHSVMK NLGEKCSVQD CKKMISKVDI DGDGCVNFDE FKKMMSNGGG A

Arabidopsis Description

CML24TCH2 [Source:UniProtKB/TrEMBL;Acc:A0A178UBB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.