Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96150 | Canola | cytosol | 78.98 | 81.05 |
| Bra004165.1-P | Field mustard | cytosol | 78.98 | 81.05 |
| CDY55679 | Canola | cytosol | 78.34 | 80.39 |
| AT5G37770.1 | Thale cress | cytosol | 75.16 | 73.29 |
| KRH30955 | Soybean | cytosol | 50.32 | 57.66 |
| PGSC0003DMT400026987 | Potato | cytosol | 52.87 | 57.24 |
| Solyc02g063350.1.1 | Tomato | cytosol | 52.23 | 56.55 |
| KRG97926 | Soybean | cytosol | 49.68 | 56.12 |
| KRH73006 | Soybean | cytosol | 48.41 | 53.9 |
| VIT_14s0006g01400.t01 | Wine grape | cytosol | 50.96 | 53.33 |
| PGSC0003DMT400078654 | Potato | cytosol | 52.87 | 53.21 |
| KRH17370 | Soybean | cytosol | 47.77 | 53.19 |
| Solyc02g091500.1.1 | Tomato | cytosol | 51.59 | 51.92 |
| AT1G18210.1 | Thale cress | cytosol | 44.59 | 41.18 |
| AT1G73630.1 | Thale cress | cytosol | 42.04 | 40.49 |
| AT4G12860.1 | Thale cress | cytosol | 36.94 | 38.16 |
| AT3G07490.1 | Thale cress | cytosol | 36.94 | 37.91 |
| AT1G05990.1 | Thale cress | cytosol | 35.03 | 36.67 |
| AT2G15680.1 | Thale cress | plastid | 41.4 | 34.76 |
| AT1G24620.1 | Thale cress | cytosol | 40.13 | 33.87 |
| AT4G03290.1 | Thale cress | cytosol | 31.85 | 32.47 |
| AT5G44460.1 | Thale cress | cytosol | 35.03 | 30.39 |
| AT3G59440.1 | Thale cress | endoplasmic reticulum, extracellular | 35.03 | 28.21 |
| AT2G43290.1 | Thale cress | extracellular | 37.58 | 27.44 |
| AT3G10190.1 | Thale cress | cytosol, mitochondrion | 36.31 | 27.27 |
| AT4G20780.1 | Thale cress | cytosol | 33.12 | 27.23 |
| AT2G41410.1 | Thale cress | cytosol, mitochondrion, plastid | 33.76 | 24.54 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:842958 | ProteinID:AAG52166.1 | ProteinID:AEE34504.1 | ArrayExpress:AT1G66400 |
| EnsemblPlantsGene:AT1G66400 | RefSeq:AT1G66400 | TAIR:AT1G66400 | RefSeq:AT1G66400-TAIR-G | EnsemblPlants:AT1G66400.1 | TAIR:AT1G66400.1 |
| EMBL:AY063853 | EMBL:AY088814 | EMBL:AY117325 | Symbol:CML23 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009909 | GO:GO:0009987 |
| GO:GO:0046872 | GO:GO:0080164 | InterPro:IPR002048 | RefSeq:NP_564874.1 | PFAM:PF13499 | PO:PO:0000003 |
| PO:PO:0000013 | PO:PO:0000025 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001185 |
| PO:PO:0006020 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009053 | PO:PO:0020006 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF573 | UniProt:Q9C8Y1 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00000A9735 | : | : | : |
Description
CML23Probable calcium-binding protein CML23 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8Y1]
Coordinates
chr1:-:24770419..24771393
Molecular Weight (calculated)
17654.8 Da
IEP (calculated)
4.355
GRAVY (calculated)
-0.564
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKNVSRNCL GSMEDIKKVF QRFDKNNDGK ISIDELKDVI GALSPNASQE ETKAMMKEFD LDGNGFIDLD EFVALFQISD QSSNNSAIRD LKEAFDLYDL
101: DRNGRISANE LHSVMKNLGE KCSIQDCQRM INKVDSDGDG CVDFEEFKKM MMINGSA
101: DRNGRISANE LHSVMKNLGE KCSIQDCQRM INKVDSDGDG CVDFEEFKKM MMINGSA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.