Factsheet for AT3G59440.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

endoplasmic reticulum 6
golgi 5
extracellular 6
vacuole 4
plasma membrane 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06002	Canola	extracellular, vacuole	89.23	87.88
Bra007450.1-P	Field mustard	endoplasmic reticulum, vacuole	89.23	87.88
CDY72611	Canola	extracellular, vacuole	89.74	87.5
CDX67796	Canola	vacuole	88.72	85.22
Bra003376.1-P	Field mustard	vacuole	88.72	85.22
CDX98375	Canola	endoplasmic reticulum	88.72	84.8
AT2G43290.1	Thale cress	extracellular	76.41	69.3
KRH29625	Soybean	cytosol	36.41	66.98
AT3G07490.1	Thale cress	cytosol	52.31	66.67
Solyc05g050750.1.1	Tomato	cytosol, unclear	50.77	66.0
PGSC0003DMT400018016	Potato	cytosol	50.77	66.0
AT1G05990.1	Thale cress	cytosol	50.77	66.0
AT4G03290.1	Thale cress	cytosol	49.23	62.34
AT4G12860.1	Thale cress	cytosol	46.67	59.87
VIT_05s0102g00450.t01	Wine grape	endoplasmic reticulum, golgi	64.62	58.88
Solyc11g044920.1.1	Tomato	cytosol	34.36	55.37
PGSC0003DMT400069195	Potato	golgi, plastid	60.0	53.42
KRH24625	Soybean	cytosol	59.49	52.49
AT5G37770.1	Thale cress	cytosol	29.74	36.02
AT1G66400.1	Thale cress	cytosol	28.21	35.03
AT5G44460.1	Thale cress	cytosol	30.77	33.15
AT4G20780.1	Thale cress	cytosol	32.31	32.98
AT1G18210.1	Thale cress	cytosol	28.72	32.94
AT2G15680.1	Thale cress	plastid	29.74	31.02
AT1G73630.1	Thale cress	cytosol	25.13	30.06
AT1G24620.1	Thale cress	cytosol	27.18	28.49
AT3G10190.1	Thale cress	cytosol, mitochondrion	24.62	22.97
AT2G41410.1	Thale cress	cytosol, mitochondrion, plastid	22.56	20.37

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EntrezGene:825113	ProteinID:AEE79924.1	EMBL:AK229731	ArrayExpress:AT3G59440
EnsemblPlantsGene:AT3G59440	RefSeq:AT3G59440	TAIR:AT3G59440	RefSeq:AT3G59440-TAIR-G	EnsemblPlants:AT3G59440.1	TAIR:AT3G59440.1
ProteinID:CAB91614.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0012505	GO:GO:0046872
InterPro:IPR002048	RefSeq:NP_191503.1	PFAM:PF13499	PO:PO:0009005	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR10891	PANTHER:PTHR10891:SF662	UniProt:Q9LX27	SMART:SM00054	SUPFAM:SSF47473	SignalP:SignalP-noTM
UniParc:UPI00000A684D	SEG:seg	:	:	:	:

Description

CML4Calmodulin-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX27]

Coordinates

chr3:+:21970355..21971125

Molecular Weight (calculated)

22378.6 Da

IEP (calculated)

4.072

GRAVY (calculated)

-0.467

Length

195 amino acids

Sequence
(BLAST)

001: MVRVFLLYNL FNSFLLCLVP KKLRVFFPPS WYIDDKNPPP PDESETESPV DLKRVFQMFD KNGDGRITKE ELNDSLENLG IFMPDKDLIQ MIQKMDANGD
101: GCVDINEFES LYGSIVEEKE EGDMRDAFNV FDQDGDGFIT VEELNSVMTS LGLKQGKTLE CCKEMIMQVD EDGDGRVNYK EFLQMMKSGD FSNRS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.