Factsheet for Bra003376.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 7
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67796	Canola	vacuole	99.01	99.01
CDX98375	Canola	endoplasmic reticulum	97.54	97.06
Bra007450.1-P	Field mustard	endoplasmic reticulum, vacuole	88.18	90.4
AT3G59440.1	Thale cress	endoplasmic reticulum, extracellular	85.22	88.72
Bra035972.1-P	Field mustard	cytosol	43.84	80.18
Bra034870.1-P	Field mustard	cytosol	62.56	75.15
Bra037722.1-P	Field mustard	cytosol	62.56	75.15
Bra019554.1-P	Field mustard	cytosol	62.56	75.15
Bra001254.1-P	Field mustard	cytosol	52.22	69.28
KRH29625	Soybean	cytosol	35.47	67.92
Solyc05g050750.1.1	Tomato	cytosol, unclear	48.77	66.0
PGSC0003DMT400018016	Potato	cytosol	48.77	66.0
Bra000836.1-P	Field mustard	cytosol	49.26	64.94
Bra040379.1-P	Field mustard	cytosol	46.8	63.76
Bra032677.1-P	Field mustard	cytosol	45.32	60.53
Bra034907.1-P	Field mustard	cytosol	44.34	59.21
VIT_05s0102g00450.t01	Wine grape	endoplasmic reticulum, golgi	61.08	57.94
Solyc11g044920.1.1	Tomato	cytosol	33.5	56.2
KRH24625	Soybean	cytosol	60.1	55.2
PGSC0003DMT400069195	Potato	golgi, plastid	59.11	54.79
Bra004165.1-P	Field mustard	cytosol	30.05	39.87
Bra025439.1-P	Field mustard	cytosol	29.56	37.5
Bra016936.1-P	Field mustard	cytosol	18.72	36.19
Bra033745.1-P	Field mustard	cytosol	31.53	35.16
Bra016564.1-P	Field mustard	cytosol	29.56	34.48
Bra032785.1-P	Field mustard	cytosol	21.67	34.38
Bra039511.1-P	Field mustard	cytosol	30.54	34.07
Bra025924.1-P	Field mustard	cytosol	27.59	33.53
Bra013470.1-P	Field mustard	cytosol	31.03	33.51
Bra015979.1-P	Field mustard	cytosol	25.62	32.7
Bra020916.1-P	Field mustard	cytosol, plastid	29.56	32.61
Bra039845.1-P	Field mustard	plastid	29.06	31.22
Bra010974.1-P	Field mustard	cytosol	28.57	31.02
Bra012497.1-P	Field mustard	cytosol	28.08	30.98
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	26.11	24.88
Bra038801.1-P	Field mustard	cytosol	31.03	24.14
Bra029821.1-P	Field mustard	plastid	24.14	23.56

Protein Annotations

EnsemblPlants:Bra003376.1	EnsemblPlants:Bra003376.1-P	EnsemblPlantsGene:Bra003376	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF662	PFAM:PF13499	PFscan:PS50222	PRINTS:PR01697	ScanProsite:PS00018	SignalP:SignalP-noTM
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000254170E	UniProt:M4CGP3	MapMan:35.1	:

Description

AT3G59440 (E=4e-097) | calcium-binding protein, putative

Coordinates

chrA07:+:12910998..12911609

Molecular Weight (calculated)

23095.6 Da

IEP (calculated)

4.219

GRAVY (calculated)

-0.378

Length

203 amino acids

Sequence
(BLAST)

001: MVRVFLLYNL INSFLLCLVP KKLRVLFPPS WYIDDNIPPP LSEPEPKSQT RTDPVDLKQV FQMFDKNGDG RITKEELNDS LENLGIFMPD KDLIQMIHKM
101: DANGDGCVDI HEFESLYGSI VVEKEEEDMR DAFNVFDQDG DGFISVEELK SVMASLGLKQ GKTLECCKEM IMQVDEDGDG RVNYKEFLQM MKTGGFSNTS
201: SSN

Best Arabidopsis Sequence Match ( AT3G59440.1 )
(BLAST)

001: MVRVFLLYNL FNSFLLCLVP KKLRVFFPPS WYIDDKNPPP PDESETESPV DLKRVFQMFD KNGDGRITKE ELNDSLENLG IFMPDKDLIQ MIQKMDANGD
101: GCVDINEFES LYGSIVEEKE EGDMRDAFNV FDQDGDGFIT VEELNSVMTS LGLKQGKTLE CCKEMIMQVD EDGDGRVNYK EFLQMMKSGD FSNRS

Arabidopsis Description

CML4Calmodulin-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX27]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.