Factsheet for Bra032785.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27574	Canola	cytosol	100.0	67.02
CDX84967	Canola	cytosol	98.44	66.67
AT1G24620.1	Thale cress	cytosol	93.75	64.52
Bra010974.1-P	Field mustard	cytosol	92.19	63.1
Bra012497.1-P	Field mustard	cytosol	87.5	60.87
KRH37459	Soybean	cytosol	46.09	57.84
KRH75577	Soybean	cytosol	53.91	45.39
Solyc01g005370.2.1	Tomato	cytosol	58.59	43.6
PGSC0003DMT400025178	Potato	cytosol	58.59	43.1
Solyc04g008000.2.1	Tomato	cytosol, plastid	61.72	41.36
PGSC0003DMT400075801	Potato	plastid	61.72	40.72
KRH49632	Soybean	cytosol, mitochondrion, plastid	57.81	40.66
KRH60410	Soybean	cytosol, plastid	59.38	40.43
Bra035972.1-P	Field mustard	cytosol	33.59	38.74
Bra016936.1-P	Field mustard	cytosol	28.91	35.24
Bra040379.1-P	Field mustard	cytosol	39.06	33.56
Bra000836.1-P	Field mustard	cytosol	39.84	33.12
Bra025439.1-P	Field mustard	cytosol	39.84	31.88
Bra001254.1-P	Field mustard	cytosol	37.5	31.37
Bra004165.1-P	Field mustard	cytosol	37.5	31.37
Bra034907.1-P	Field mustard	cytosol	36.72	30.92
Bra025924.1-P	Field mustard	cytosol	39.06	29.94
Bra016564.1-P	Field mustard	cytosol	40.62	29.89
Bra032677.1-P	Field mustard	cytosol	35.16	29.61
Os01t0949500-01	Rice	plasma membrane	42.19	29.19
EES04217	Sorghum	cytosol, mitochondrion, plastid	42.97	29.1
TraesCS3D01G484900.1	Wheat	cytosol, mitochondrion	42.19	29.03
Bra015979.1-P	Field mustard	cytosol	35.94	28.93
TraesCS3B01G538300.1	Wheat	cytosol, plastid	42.19	28.42
TraesCS3B01G536200.1	Wheat	cytosol, plastid	42.19	28.42
TraesCS3D01G483200.1	Wheat	cytosol, plastid	42.19	28.27
TraesCS3A01G488400.1	Wheat	cytosol, plastid	42.19	28.27
Zm00001d042107_P001	Maize	mitochondrion	42.19	27.84
Bra034870.1-P	Field mustard	cytosol	36.72	27.81
Bra037722.1-P	Field mustard	cytosol	36.72	27.81
Bra019554.1-P	Field mustard	cytosol	36.72	27.81
Zm00001d009985_P001	Maize	cytosol, mitochondrion, plastid	40.62	27.51
HORVU3Hr1G107090.2	Barley	cytosol, plastid	40.62	27.23
HORVU1Hr1G057410.1	Barley	mitochondrion	39.06	26.45
TraesCS1D01G239000.1	Wheat	mitochondrion	39.06	26.45
TraesCS1B01G250900.1	Wheat	mitochondrion	39.06	26.45
TraesCS1A01G238800.1	Wheat	mitochondrion	39.06	26.45
EES19444	Sorghum	plastid	39.06	25.13
Os05t0380900-01	Rice	cytosol, mitochondrion	39.06	24.88
Zm00001d038061_P001	Maize	mitochondrion	39.06	24.51
Bra033745.1-P	Field mustard	cytosol	33.59	23.63
Bra039511.1-P	Field mustard	cytosol	32.03	22.53
Bra013470.1-P	Field mustard	cytosol	32.81	22.34
Bra020916.1-P	Field mustard	cytosol, plastid	32.03	22.28
Bra039845.1-P	Field mustard	plastid	32.81	22.22
Bra007450.1-P	Field mustard	endoplasmic reticulum, vacuole	34.38	22.22
Bra003376.1-P	Field mustard	vacuole	34.38	21.67
Bra029821.1-P	Field mustard	plastid	33.59	20.67
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	29.69	17.84
Bra038801.1-P	Field mustard	cytosol	32.03	15.71

Protein Annotations

EnsemblPlants:Bra032785.1	EnsemblPlants:Bra032785.1-P	EnsemblPlantsGene:Bra032785	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF738	PFAM:PF00036	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000254266B	UniProt:M4EVF2	MapMan:35.1	:

Description

AT1G24620 (E=8e-063) | polcalcin, putative / calcium-binding pollen allergen, putative

Coordinates

chrA09:-:12848491..12848877

Molecular Weight (calculated)

13990.4 Da

IEP (calculated)

3.997

GRAVY (calculated)

-0.521

Length

128 amino acids

Sequence
(BLAST)

001: MASLGNEVPE EVLEKAITEI DRKGDGYINF EEFVELNTKG MDQNDVLENL KDAFSVYDID GNGSISAEEL HEVLRSLGDE CSIGECRKMI GGVDKDGDGT
101: IDFEEFKIMM TMGSRRDNVM GGGGGGQR

Best Arabidopsis Sequence Match ( AT1G24620.1 )
(BLAST)

001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR

Arabidopsis Description

CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.