Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G536200.1 | Wheat | cytosol, plastid | 99.47 | 99.47 |
| TraesCS3D01G483200.1 | Wheat | cytosol, plastid | 96.84 | 96.34 |
| TraesCS3D01G484900.1 | Wheat | cytosol, mitochondrion | 93.16 | 95.16 |
| HORVU3Hr1G107090.2 | Barley | cytosol, plastid | 93.16 | 92.67 |
| TraesCS3A01G488400.1 | Wheat | cytosol, plastid | 91.58 | 91.1 |
| Os01t0949500-01 | Rice | plasma membrane | 78.95 | 81.08 |
| EES04217 | Sorghum | cytosol, mitochondrion, plastid | 75.26 | 75.66 |
| Zm00001d042107_P001 | Maize | mitochondrion | 75.79 | 74.23 |
| TraesCS1B01G250900.1 | Wheat | mitochondrion | 66.84 | 67.2 |
| TraesCS5B01G134200.1 | Wheat | cytosol | 23.68 | 50.0 |
| KRH75577 | Soybean | cytosol | 37.37 | 46.71 |
| PGSC0003DMT400025178 | Potato | cytosol | 42.63 | 46.55 |
| Solyc01g005370.2.1 | Tomato | cytosol | 42.11 | 46.51 |
| KRH49632 | Soybean | cytosol, mitochondrion, plastid | 43.68 | 45.6 |
| KRH60410 | Soybean | cytosol, plastid | 44.21 | 44.68 |
| Solyc04g008000.2.1 | Tomato | cytosol, plastid | 44.74 | 44.5 |
| PGSC0003DMT400075801 | Potato | plastid | 44.74 | 43.81 |
| Bra032785.1-P | Field mustard | cytosol | 28.42 | 42.19 |
| CDY40786 | Canola | cytosol | 40.0 | 41.3 |
| CDY03874 | Canola | cytosol | 40.0 | 41.3 |
| TraesCS1B01G148000.1 | Wheat | cytosol | 37.37 | 41.28 |
| Bra012497.1-P | Field mustard | cytosol | 39.47 | 40.76 |
| AT1G24620.1 | Thale cress | cytosol | 39.47 | 40.32 |
| KRH37459 | Soybean | cytosol | 21.58 | 40.2 |
| CDX84967 | Canola | cytosol | 38.42 | 38.62 |
| Bra010974.1-P | Field mustard | cytosol | 37.89 | 38.5 |
| CDY36129 | Canola | cytosol | 37.89 | 38.5 |
| CDY27574 | Canola | cytosol | 38.42 | 38.22 |
| TraesCS3B01G045500.1 | Wheat | cytosol | 34.21 | 34.76 |
| TraesCS2B01G367500.1 | Wheat | plastid | 38.42 | 34.11 |
| TraesCS5B01G342800.1 | Wheat | cytosol | 28.42 | 33.33 |
| TraesCS2B01G120900.1 | Wheat | plastid | 33.16 | 32.98 |
| TraesCS5B01G237500.1 | Wheat | mitochondrion | 30.53 | 31.69 |
| TraesCS7B01G206200.1 | Wheat | plastid | 31.58 | 30.3 |
| TraesCS4B01G172400.1 | Wheat | plastid | 30.0 | 30.16 |
| TraesCS7B01G034000.1 | Wheat | endoplasmic reticulum | 36.84 | 29.91 |
| CDY24421 | Canola | endoplasmic reticulum, golgi | 37.89 | 26.57 |
| TraesCS3B01G536600.1 | Wheat | nucleus, plastid | 26.84 | 25.89 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G538300.1 | EnsemblPlantsGene:TraesCS3B01G538300 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF581 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg | SMART:SM00054 | SUPFAM:SSF47473 |
| TIGR:cd00051 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:777997148..777997720
Molecular Weight (calculated)
20303.8 Da
IEP (calculated)
4.487
GRAVY (calculated)
-0.444
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKIKMPALF RRRSSSKSRS ASPPPTPQEE EGTRPASGAG SPARSAEEEM ERVFRKFDAN GDGRISRPEL AALFESLGHA ATEDELTRMM AEADADGDGF
101: ISLEEFAALN ATAAGDDEED LRLAFKVFDA DGSGDISAAE LARVLHGLGE KATVQQCRRM IEGVDKNGDG LISFDEFKVM MASGLAAKMA
101: ISLEEFAALN ATAAGDDEED LRLAFKVFDA DGSGDISAAE LARVLHGLGE KATVQQCRRM IEGVDKNGDG LISFDEFKVM MASGLAAKMA
001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR
Arabidopsis Description
CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.